RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 HIP1RO75146 1068 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 MCF2P10911 925 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 GJA1P17302 382 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 PSMC3P17980 439 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 RPL9P32969 192 aaKnown RBP12.42□□□□□ -0.42
SNU13-208ENST00000488571 VIPR2P41587 438 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 EPHA5P54756 1037 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 LMNB2Q03252 620 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 SAFBQ15424 915 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNU13-208ENST00000488571 CTXN3Q4LDR2 81 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
SNU13-208ENST00000488571 TMEM130Q8N3G9 435 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 IRF7Q92985 503 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
SNU13-208ENST00000488571 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
SNU13-208ENST00000488571 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 RUSC1Q9BVN2 902 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
SNU13-208ENST00000488571 SPTBN2O15020 2390 aa12.42□□□□□ -0.42
SNU13-208ENST00000488571 EPG5Q9HCE0 2579 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 PRR5-ARHGAP8B1AHC4 643 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 VNN2O95498 520 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 SDHBP21912 280 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 GDI1P31150 447 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 ARHGAP8P85298 464 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 TWF1Q12792 350 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
SNU13-208ENST00000488571 SLC10A6Q3KNW5 377 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 MPZL3Q6UWV2 235 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 SNX29Q8TEQ0 813 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 FAM3CQ92520 227 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 DDX12PQ92771 950 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
SNU13-208ENST00000488571 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 AFF4Q9UHB7 1163 aaKnown RBP12.41□□□□□ -0.42
SNU13-208ENST00000488571 USP18Q9UMW8 372 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 PIAS3Q9Y6X2 628 aa12.41□□□□□ -0.42
SNU13-208ENST00000488571 DCDC2BA2VCK2 349 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 PP2D1A8MPX8 630 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 CHRNB1P11230 501 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 MYL4P12829 197 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 MCM4P33991 863 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 TOB1P50616 345 aaPredicted RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 GAS6Q14393 721 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 PDIA5Q14554 519 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 TEAD2Q15562 447 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 IL17AQ16552 155 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 LPAL2Q16609 132 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 SEZ6Q53EL9 994 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 WDR44Q5JSH3 913 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 CYP4A22Q5TCH4 519 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 RINT1Q6NUQ1 792 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 C1orf186Q6ZWK4 172 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 KCNK18Q7Z418 384 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 ELMOD1Q8N336 334 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 FBXO18Q8NFZ0 1043 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 ZNF512Q96ME7 567 aaPredicted RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 NTPCRQ9BSD7 190 aaKnown RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 IER2Q9BTL4 223 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 LMAN1LQ9HAT1 526 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 KMT5AQ9NQR1 393 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 GMEB2Q9UKD1 530 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 MAFFQ9ULX9 164 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
SNU13-208ENST00000488571 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
SNU13-208ENST00000488571 SFI1A8K8P3 1242 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 M0QZQ0 153 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 SLC16A4O15374 487 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 KRT37O76014 449 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
SNU13-208ENST00000488571 CPB1P15086 417 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 CDC25AP30304 524 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 CCR3P51677 355 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 NRLP54845 237 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 SATB1Q01826 763 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 PTGDRQ13258 359 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 LAIR1Q6GTX8 287 aa12.39□□□□□ -0.43
SNU13-208ENST00000488571 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms