RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 DPP3Q9NY33 737 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 RBAKQ9NYW8 714 aaPredicted RBP15.39■□□□□ 0.05
COL9A2-208ENST00000488463 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 DPP7Q9UHL4 492 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 MUTYHQ9UIF7 546 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 FBXL5Q9UKA1 691 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 PTPRJQ12913 1337 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 KIAA0391O15091 583 aaKnown RBP15.38■□□□□ 0.05
COL9A2-208ENST00000488463 PLA2G5P39877 138 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 DPYDQ12882 1025 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 SNW1Q13573 536 aaKnown RBP15.38■□□□□ 0.05
COL9A2-208ENST00000488463 KMT5BQ4FZB7 885 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 ARMCX5Q6P1M9 558 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 C12orf56Q8IXR9 622 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-208ENST00000488463 C1orf127Q8N9H9 656 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 ENGASEQ8NFI3 743 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 ZNF461Q8TAF7 563 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 PDE11AQ9HCR9 933 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 WDR6Q9NNW5 1121 aaKnown RBP15.38■□□□□ 0.05
COL9A2-208ENST00000488463 USTQ9Y2C2 406 aa15.38■□□□□ 0.05
COL9A2-208ENST00000488463 TIMM13Q9Y5L4 95 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-208ENST00000488463 ZNF318Q5VUA4 2279 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 DCXO43602 365 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 GPR37L1O60883 481 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 ZNF202O95125 648 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 VNN2O95498 520 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 CYP11A1P05108 521 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 C8AP07357 584 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 POU2F2P09086 479 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 TYMPP19971 482 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 SP100P23497 879 aaPredicted RBP15.37■□□□□ 0.05
COL9A2-208ENST00000488463 HOXA9P31269 272 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 SNRPFP62306 86 aaKnown RBP15.37■□□□□ 0.05
COL9A2-208ENST00000488463 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
COL9A2-208ENST00000488463 APPL2Q8NEU8 664 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 TMEM174Q8WUU8 243 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 SMG7Q92540 1137 aaKnown RBP15.37■□□□□ 0.05
COL9A2-208ENST00000488463 SENP8Q96LD8 212 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 KCTD10Q9H3F6 313 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 SIX4Q9UIU6 781 aa15.37■□□□□ 0.05
COL9A2-208ENST00000488463 H7C4K7 107 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 CLIC2O15247 247 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 RHOBTB3O94955 611 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 SEC24AO95486 1093 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
COL9A2-208ENST00000488463 HNRNPA1P09651 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL9A2-208ENST00000488463 ATF2P15336 505 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 PAX3P23760 479 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 PSMD2Q13200 908 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 UVSSAQ2YD98 709 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 CTXN3Q4LDR2 81 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 ZNF280DQ6N043 979 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 ELMSAN1Q6PJG2 1045 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 RTL10Q7L3V2 364 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 ZDHHC14Q8IZN3 488 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 RTP3Q9BQQ7 232 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 CLUHO75153 1309 aa15.36■□□□□ 0.05
COL9A2-208ENST00000488463 ARHGEF37A1IGU5 675 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 ZNF233A6NK53 670 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 ALADP13716 330 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
COL9A2-208ENST00000488463 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
COL9A2-208ENST00000488463 TMEM31Q5JXX7 168 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 TPGS2Q68CL5 300 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 CCDC149Q6ZUS6 474 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 TCEAL8Q8IYN2 117 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 OR5B17Q8NGF7 314 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
COL9A2-208ENST00000488463 CGNQ9P2M7 1197 aaKnown RBP15.35■□□□□ 0.05
COL9A2-208ENST00000488463 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
COL9A2-208ENST00000488463 ARIH1Q9Y4X5 557 aaPredicted RBP15.35■□□□□ 0.05
COL9A2-208ENST00000488463 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 CCL16O15467 120 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
COL9A2-208ENST00000488463 TAF6P49848 677 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 TFAMQ00059 246 aaKnown RBP15.34■□□□□ 0.05
COL9A2-208ENST00000488463 PPM1LQ5SGD2 360 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 LIN9Q5TKA1 542 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 LMBRD2Q68DH5 695 aaPredicted RBP15.34■□□□□ 0.05
COL9A2-208ENST00000488463 DSTYKQ6XUX3 929 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 XXYLT1Q8NBI6 393 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 PLEKHO2Q8TD55 490 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 MYADMQ96S97 322 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 MTMR12Q9C0I1 747 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 CRISPLD1Q9H336 500 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
COL9A2-208ENST00000488463 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
COL9A2-208ENST00000488463 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
COL9A2-208ENST00000488463 FAM86C2PA6NEL3 165 aa15.33■□□□□ 0.04
COL9A2-208ENST00000488463 ITGB3P05106 788 aa15.33■□□□□ 0.04
COL9A2-208ENST00000488463 OR4Q2P0C623 313 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms