RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SMAD2Q15796 467 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 NFIL3Q16649 462 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 COBLL1Q53SF7 1204 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 PALB2Q86YC2 1186 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 WDR49Q8IV35 697 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 C12orf76Q8N812 135 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 OR5B17Q8NGF7 314 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 FEZF2Q8TBJ5 459 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 PLEKHO2Q8TD55 490 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 INTS13Q9NVM9 706 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 SIX4Q9UIU6 781 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 MAN1B1Q9UKM7 699 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 TBC1D4O60343 1298 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 C1RP00736 705 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 DLATP10515 647 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 PRCPP42785 496 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 CASP4P49662 377 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 TAF6P49848 677 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 MYBPC2Q14324 1141 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 LILRA6Q6PI73 481 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 APPL2Q8NEU8 664 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 CACTINQ8WUQ7 758 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 SUSD6Q92537 303 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 CCDC127Q96BQ5 260 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 SENP8Q96LD8 212 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 CGRRF1Q99675 332 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 SFXN1Q9H9B4 322 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 ITGA11Q9UKX5 1188 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 C5orf42Q9H799 3197 aa17.28■□□□□ 0.36
ERGIC3-216ENST00000488384 SPATA31D3P0C874 917 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 ODC1P11926 461 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 TYMPP19971 482 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 PAX3P23760 479 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 NR2F2P24468 414 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 OR1D2P34982 312 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 RAB33AQ14088 237 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 RARS2Q5T160 578 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 SLC8B1Q6J4K2 584 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 ZNF280DQ6N043 979 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 SPATA31D4Q6ZUB0 917 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 BORCS6Q96GS4 357 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 POP1Q99575 1024 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 FBXL5Q9UKA1 691 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
ERGIC3-216ENST00000488384 MTCL1Q9Y4B5 1905 aaKnown RBP17.27■□□□□ 0.35
ERGIC3-216ENST00000488384 H7C4K7 107 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 OAZ2O95190 189 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 TNNC2P02585 160 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 BMP6P22004 513 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 PNPLA4P41247 253 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 ROR1Q01973 937 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 YWHAHQ04917 246 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 ITIH3Q06033 890 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 DUOXA2Q1HG44 320 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 EDRF1Q3B7T1 1238 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 SV2CQ496J9 727 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 CTXN3Q4LDR2 81 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 KREMEN2Q8NCW0 462 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 ADAM7Q9H2U9 754 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 DENND4AQ7Z401 1863 aa17.26■□□□□ 0.35
ERGIC3-216ENST00000488384 WDR27A2RRH5 827 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 KPNA7A9QM74 516 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 RFPL2O75678 378 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 CYP11A1P05108 521 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 KRT19P08727 400 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 WEE2P0C1S8 567 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 TNNI1P19237 187 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 PMS1P54277 932 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 RBP5P82980 135 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 MORC3Q14149 939 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 CAMK4Q16566 473 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 ISM2Q6H9L7 571 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 TMC5Q6UXY8 1006 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 CSGALNACT2Q8N6G5 542 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 CMASQ8NFW8 434 aaPredicted RBP17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 ZNF516Q92618 1163 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 GTPBP4Q9BZE4 634 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 PLEKHA4Q9H4M7 779 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 DPP7Q9UHL4 492 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms