RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SURF1Q15526 300 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 NFKBIBQ15653 356 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 VARS2Q5ST30 1063 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 OSTM1Q86WC4 334 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 NT5DC4Q86YG4 428 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 MLKLQ8NB16 471 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 CACTINQ8WUQ7 758 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 MRPL17Q9NRX2 175 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 CLDND1Q9NY35 253 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 BARX2Q9UMQ3 279 aaPredicted RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 POLIQ9UNA4 740 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 SPTBN5Q9NRC6 3674 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 M0QZQ0 153 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 CYB561D2O14569 222 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 TBX10O75333 385 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 OR4Q2P0C623 313 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 TAF6P49848 677 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 ARPP19P56211 112 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 RBP5P82980 135 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 BIRC3Q13489 604 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 PSMD5Q16401 504 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 CCDC142Q17RM4 750 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 WSCD1Q658N2 575 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 SPOPLQ6IQ16 392 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 C15orf39Q6ZRI6 1047 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 SV2AQ7L0J3 742 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 IRF2BP1Q8IU81 584 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 C12orf76Q8N812 135 aaPredicted RBP18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 TAS1R2Q8TE23 839 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 SLC22A17Q8WUG5 538 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 PIK3R5Q8WYR1 880 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 RTP3Q9BQQ7 232 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 PI4K2AQ9BTU6 479 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 RXFP1Q9HBX9 757 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 ITGA11Q9UKX5 1188 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 NME7Q9Y5B8 376 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 REV3LO60673 3130 aa18.48■□□□□ 0.55
SHROOM1-205ENST00000488072 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 MAPK13O15264 365 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 EPB41P11171 864 aaKnown RBP18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 KLRC2P26717 231 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 ADAM15Q13444 863 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 KCNC3Q14003 757 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 MRPL58Q14197 206 aaKnown RBP18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 KLHL40Q2TBA0 621 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 CBWD6Q4V339 395 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 DCAF17Q5H9S7 520 aaPredicted RBP18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 CBWD3Q5JTY5 395 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 CBWD5Q5RIA9 395 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 FILIP1Q7Z7B0 1213 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 SEMA4DQ92854 862 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 GTPBP4Q9BZE4 634 aaKnown RBP18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 XYLT2Q9H1B5 865 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 CLEC1BQ9P126 229 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 L1RE1Q9UN81 338 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 HCFC2Q9Y5Z7 792 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 IRAK3Q9Y616 596 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 EYSQ5T1H1 3165 aa18.47■□□□□ 0.55
SHROOM1-205ENST00000488072 KPNA7A9QM74 516 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 SLC16A3O15427 465 aaKnown RBP18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 TBC1D4O60343 1298 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 PHACTR2O75167 634 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 HLA-DRAP01903 254 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 KRT13P13646 458 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 OR1D2P34982 312 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 TYRO3Q06418 890 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 CTC1Q2NKJ3 1217 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 ZACNQ401N2 412 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 CCDC40Q4G0X9 1142 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 INTS8Q75QN2 995 aaKnown RBP18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 CREBRFQ8IUR6 639 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 LPIN3Q9BQK8 851 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 MKNK1Q9BUB5 465 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 SAMSN1Q9NSI8 373 aaKnown RBP18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 CDY1Q9Y6F8 540 aa18.46■□□□□ 0.55
SHROOM1-205ENST00000488072 BICDL2A1A5D9 508 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 SYCE3A1L190 88 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 CARNS1A5YM72 827 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 TRAPPC3O43617 180 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 KCNA5P22460 613 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 PPP1R2P41236 205 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 RAP1GAPP47736 663 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 ELAVL2Q12926 359 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 NCOA4Q13772 614 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 COL19A1Q14993 1142 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 PDE12Q6L8Q7 609 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 SASS6Q6UVJ0 657 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms