RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HLA-DOAP06340 250 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 SNRPA1P09661 255 aaKnown RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 LPOP22079 712 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 MPLP40238 635 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 FLT3LGP49771 235 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 BLOC1S1P78537 153 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 APBA1Q02410 837 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 PPP3CAQ08209 521 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 RESTQ13127 1097 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 SP140Q13342 867 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 ATAT1Q5SQI0 421 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 ANKS6Q68DC2 871 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 EPM2AIP1Q7L775 607 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 DAAM2Q86T65 1068 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 AOPEPQ8N6M6 819 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 C3orf20Q8ND61 904 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 TTC8Q8TAM2 541 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 CCHCR1Q8TD31 782 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 SMG7Q92540 1137 aaKnown RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 CDK5RAP3Q96JB5 506 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 TMX3Q96JJ7 454 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 SLC29A3Q9BZD2 475 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 GTPBP4Q9BZE4 634 aaKnown RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 CALCOCO1Q9P1Z2 691 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 FEZ2Q9UHY8 353 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 AJAP1Q9UKB5 411 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 LIMCH1Q9UPQ0 1083 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 USP15Q9Y4E8 981 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 IPPQ9Y573 584 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 SALL3Q9BXA9 1300 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 PROB1E7EW31 1015 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 H3BML4 177 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 ADCY6O43306 1168 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 MATN4O95460 622 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 MYL1P05976 194 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 FTH1P19P0C7X4 201 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 RAP2AP10114 183 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 ALAS1P13196 640 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 DDCP20711 480 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 ABCG1P45844 678 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 FOXF2Q12947 444 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 SRGAP1Q7Z6B7 1085 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 C14orf80Q86SX3 495 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 DGKHQ86XP1 1220 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 SLC35G2Q8TBE7 412 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 MDM1Q8TC05 714 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 DIS3LQ8TF46 1054 aaKnown RBP4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 SCARB1Q8WTV0 552 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 CLPTM1LQ96KA5 538 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 ALG13Q9NP73 1137 aaKnown RBP4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 SERPINB13Q9UIV8 391 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
HMGB1P36-201ENST00000487709 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 MYBBP1AQ9BQG0 1328 aaKnown RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 COL11A2P13942 1736 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 RBMXL2O75526 392 aaKnown RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 ATP5JP18859 108 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 MGAT1P26572 445 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 SREBF1P36956 1147 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 CACNB3P54284 484 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 TBX4P57082 545 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 MXRA7P84157 204 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 HDAC1Q13547 482 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 IL10RAQ13651 578 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 GBX1Q14549 363 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZNF267Q14586 743 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 C3orf36Q3SXR2 165 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 EFCAB12Q6NXP0 572 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 SRRM1Q8IYB3 904 aaKnown RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 CCDC146Q8IYE0 955 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 TRMT2AQ8IZ69 625 aaKnown RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 PRR18Q8N4B5 295 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 NLGN4YQ8NFZ3 816 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 HOXB13Q92826 284 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 KAT5Q92993 513 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 TAAR9Q96RI9 348 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 SLC12A5Q9H2X9 1139 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 WDCPQ9H6R7 721 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 LMBRD1Q9NUN5 540 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 OBP2AQ9NY56 170 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 PCDHA13Q9Y5I0 950 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 FPGT-TNNI3KV9GXZ4 949 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZMYM3Q14202 1370 aa4.73□□□□□ -1.65
HMGB1P36-201ENST00000487709 MARCH11A6NNE9 402 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 MGST3O14880 152 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 PJA2O43164 708 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 GNAI3P08754 354 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 NBPF7P0C2Y1 421 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 MTHFD1P11586 935 aaKnown RBP4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 GNALP38405 381 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 GNAI1P63096 354 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 SEPT2Q15019 361 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 FAM47AQ5JRC9 791 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 PRAMEF14Q5SWL7 426 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 DRICH1Q6PGQ1 229 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms