RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 YWHAEP62258 255 aaKnown RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 RBP5P82980 135 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 CENPCQ03188 943 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 WDR72Q3MJ13 1102 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 MEI1Q5TIA1 1274 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SLFN11Q7Z7L1 901 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 RHOT2Q8IXI1 618 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SLC43A3Q8NBI5 491 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SLC35G2Q8TBE7 412 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TSC1Q92574 1164 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 FAM124BQ9H5Z6 455 aaPredicted RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 OSGEPQ9NPF4 335 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 CHST12Q9NRB3 414 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TRMT13Q9NUP7 481 aaKnown RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 ST3GAL5Q9UNP4 418 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 A0A1W2PQ45 241 aaPredicted RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 A0A1W2PQY0 241 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 MTA2O94776 668 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 KCNE1P15382 129 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 CD58P19256 250 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 AKAP5P24588 427 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 THPOP40225 353 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 FBXO47Q5MNV8 452 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 ACAD10Q6JQN1 1059 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 ARRDC4Q8NCT1 418 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 HPDLQ96IR7 371 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 GLT1D1Q96MS3 346 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 ZSWIM1Q9BR11 485 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 RNF39Q9H2S5 420 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 CYP3A43Q9HB55 503 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TUBGCP4Q9UGJ1 667 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 GTF3C4Q9UKN8 822 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 COG5Q9UP83 839 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 AGAP1Q9UPQ3 857 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 SMIM28A0A1B0GU29 152 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 EFCAB8A8MWE9 144 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 NCK2O43639 380 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 CAND2O75155 1236 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 FTCDO95954 541 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 CYP1A2P05177 515 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 CFHP08603 1231 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 NOP2P46087 812 aaKnown RBP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 RAP1GAPP47736 663 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 NOMO3P69849 1222 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 GPC5P78333 572 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 NAA30Q147X3 362 aaPredicted RBP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 GLRA4Q5JXX5 417 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 CEP112Q8N8E3 955 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 AGO3Q9H9G7 860 aaKnown RBP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 ERVK-5Q9HDB9 667 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 UBQLN1Q9UMX0 589 aaKnown RBP10.08□□□□□ -0.8
SF3B1-211ENST00000487698 PHF24Q9UPV7 400 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 HYOU1Q9Y4L1 999 aa10.08□□□□□ -0.8
SF3B1-211ENST00000487698 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PPEF2O14830 753 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 THAP12O43422 761 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CILPO75339 1184 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 INCA1Q0VD86 236 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 RSRC2Q7L4I2 434 aaKnown RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 LRRC52Q8N7C0 313 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 BEST2Q8NFU1 509 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 C18orf25Q96B23 403 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CYFIP2Q96F07 1278 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 OSBPL9Q96SU4 736 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 GOLPH3Q9H4A6 298 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 ABCB6Q9NP58 842 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 STXBP5LQ9Y2K9 1186 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 FAM170AA1A519 330 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 GPR182O15218 404 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 LSM8O95777 96 aaKnown RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PAEPP09466 180 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 P4HA1P13674 534 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CYP3A5P20815 502 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 RAD23BP54727 409 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CDH8P55286 799 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 DSC3Q14574 896 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 LPIN1Q14693 890 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 NAA35Q5VZE5 725 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 C9orf57Q5W0N0 161 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms