RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PILRBQ9UKJ0 227 aa6.5□□□□□ -1.37
COL4A3-206ENST00000487633 TP53BP1Q12888 1972 aaPredicted RBP6.49□□□□□ -1.37
COL4A3-206ENST00000487633 ANAPC1Q9H1A4 1944 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 A0A087WWV3 80 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 PRRG1O14668 218 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 NR1I2O75469 434 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 PSMD10O75832 226 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 APBB3O95704 486 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 CFIP05156 583 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 ATXN1LP0C7T5 689 aaKnown RBP6.49□□□□□ -1.37
COL4A3-206ENST00000487633 NT5C2P49902 561 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 PTENP60484 403 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 KCNC4Q03721 635 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 CAPSQ13938 189 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 XKR3Q5GH77 459 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 CYP4A22Q5TCH4 519 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
COL4A3-206ENST00000487633 SYT13Q7L8C5 426 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 MIER3Q7Z3K6 550 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 SCUBE3Q8IX30 993 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 CCDC33Q8N5R6 958 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 CNNM3Q8NE01 707 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 STKLD1Q8NE28 680 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 EXOC6Q8TAG9 804 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 OLIG1Q8TAK6 271 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 FAM200AQ8TCP9 573 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 SLC5A5Q92911 643 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 MSANTD3Q96H12 275 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 MAP3K14Q99558 947 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 NUSAP1Q9BXS6 441 aaKnown RBP6.49□□□□□ -1.37
COL4A3-206ENST00000487633 SLITRK6Q9H5Y7 841 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 IL21RQ9HBE5 538 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 GKN1Q9NS71 199 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 DKK4Q9UBT3 224 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 FBXL5Q9UKA1 691 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 BACE2Q9Y5Z0 518 aa6.49□□□□□ -1.37
COL4A3-206ENST00000487633 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 KNL1Q8NG31 2342 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 KNTC1P50748 2209 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SPENQ96T58 3664 aaKnown RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ERICH2A1L162 156 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 INO80B-WBP1J3KQ70 363 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ZNF197O14709 1029 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 OPHN1O60890 802 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 RECQL4O94761 1208 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 B3GAT3O94766 335 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ERLIN2O94905 339 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 DKK1O94907 266 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 WISP1O95388 367 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 TDP2O95551 362 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 CIITAP33076 1130 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 P2RY2P41231 377 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 DNM2P50570 870 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SEC13P55735 322 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 LMAN2Q12907 356 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 MYO1EQ12965 1108 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 PSMD2Q13200 908 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 AP3B2Q13367 1082 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 RUNX3Q13761 415 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 MRPL58Q14197 206 aaKnown RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 MAP7D1Q3KQU3 841 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ITPRIPL2Q3MIP1 535 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ARHGAP29Q52LW3 1261 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 EEF1DP3Q658K8 133 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 HIST2H2BCQ6DN03 193 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 NOTUMQ6P988 496 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 TTC30AQ86WT1 665 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SYT12Q8IV01 421 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 NAXDQ8IW45 347 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ZNF513Q8N8E2 541 aaPredicted RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 NCOA7Q8NI08 942 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 BPIFB1Q8TDL5 484 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ERLEC1Q96DZ1 483 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ZNF512Q96ME7 567 aaPredicted RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 PGLYRP2Q96PD5 576 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SLC46A2Q9BY10 475 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 LNPKQ9C0E8 428 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 ASAH2Q9NR71 780 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 TBX20Q9UMR3 447 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 YIPF1Q9Y548 306 aa6.48□□□□□ -1.37
COL4A3-206ENST00000487633 V9GY48 417 aaPredicted RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 UTP20O75691 2785 aaKnown RBP6.48□□□□□ -1.37
COL4A3-206ENST00000487633 CITO14578 2027 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 A0A1B0GUA9 196 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GOLGA8CPA6NN73 597 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 K7EQS6 105 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 PLK4O00444 970 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TRIM66O15016 1216 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 PRC1O43663 620 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GAS7O60861 476 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 THP07101 528 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GLRA2P23416 452 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 CDC27P30260 824 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 NMT1P30419 496 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 ELF1P32519 619 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms