RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TMC6Q7Z403 805 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 ACER1Q8TDN7 264 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 ALG3Q92685 438 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 ASPSCR1Q9BZE9 553 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 LSG1Q9H089 658 aaKnown RBP7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 R3HDMLQ9H3Y0 253 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 VTA1Q9NP79 307 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 RNF186Q9NXI6 227 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 TRHDEQ9UKU6 1024 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 MYH1P12882 1939 aa7.23□□□□□ -1.25
RTFDC1-209ENST00000487211 FOCADQ5VW36 1801 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 CCL15-CCL14A0A0B4J2E2 113 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 A0A0G2JLL6 359 aaPredicted RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 BTBD19C9JJ37 291 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 MPHOSPH10O00566 681 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 ZNF213O14771 459 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 FAHP16930 419 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 BACE1P56817 501 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 YBX1P67809 324 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 SMAD3P84022 425 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 FAPQ12884 760 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 SMAD2Q15796 467 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 CCL15Q16663 113 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 KIAA1755Q5JYT7 1200 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 PRRT2Q7Z6L0 340 aaPredicted RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 ZNF444Q8N0Y2 327 aaPredicted RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 FAM43AQ8N2R8 423 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 CCDC17Q96LX7 622 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 DTLQ9NZJ0 730 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 NOC2LQ9Y3T9 749 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 BAZ2AQ9UIF9 1905 aaKnown RBP7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 ZMYM6O95789 1325 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 RAD50Q92878 1312 aa7.22□□□□□ -1.25
RTFDC1-209ENST00000487211 ROBO3Q96MS0 1386 aa7.21□□□□□ -1.25
RTFDC1-209ENST00000487211 IGKV6D-41A0A0C4DH26 115 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ORC4O43929 436 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 NMT2O60551 498 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 PAPLNO95428 1278 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 CYP21A2P08686 494 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 CETPP11597 493 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 EEF2P13639 858 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 SDHAP31040 664 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 VIPR1P32241 457 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 HMGCS2P54868 508 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ZNF200P98182 395 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 TFAP4Q01664 338 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 SREBF2Q12772 1141 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 NECTIN1Q15223 517 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 CATSPEREQ5SY80 951 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 AKNAD1Q5T1N1 836 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 OLFML2BQ68BL8 750 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ESRP1Q6NXG1 681 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ETV3LQ6ZN32 361 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 TMEM179Q6ZVK1 233 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 Q7L0L9 218 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 MIB1Q86YT6 1006 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 TBC1D10CQ8IV04 446 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ZZZ3Q8IYH5 903 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 FAM168AQ92567 244 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 ERCC4Q92889 916 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 AHCYL2Q96HN2 611 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 MS4A5Q9H3V2 200 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 IL17RBQ9NRM6 502 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 CTNNA3Q9UI47 895 aa7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 RBM8AQ9Y5S9 174 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-209ENST00000487211 C19orf81C9J6K1 198 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 PDHXO00330 501 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 RANBP6O60518 1105 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 LRG1P02750 347 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 SLC3A2P08195 630 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 MMEP08473 750 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 CD40P25942 277 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 STAT5AP42229 794 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 PHC1P78364 1004 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 IMMTQ16891 758 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 RRP12Q5JTH9 1297 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 TREML2Q5T2D2 321 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 SYDE2Q5VT97 1194 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 GADL1Q6ZQY3 521 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 MFSD6Q6ZSS7 791 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 FASTKD5Q7L8L6 764 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 CTU1Q7Z7A3 348 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 ANKRD23Q86SG2 305 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 CEP95Q96GE4 821 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 TOE1Q96GM8 510 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 KIAA1683Q9H0B3 1180 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 ZNF552Q9H707 407 aaPredicted RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 ZMAT4Q9H898 229 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms