RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 CACTINQ8WUQ7 758 aaKnown RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 ANKRD36BP1Q96IX9 119 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 FNBP1Q96RU3 617 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 KIAA1586Q9HCI6 787 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CHST7Q9NS84 486 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 DPP3Q9NY33 737 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 FNIP2Q9P278 1114 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 PRKAG3Q9UGI9 489 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 MAPK8IP1Q9UQF2 711 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CDY1Q9Y6F8 540 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 PTPRDP23468 1912 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 ARHGEF37A1IGU5 675 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 H7C4K7 107 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 SYN3O14994 580 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 RHOBTB3O94955 611 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 SMC2O95347 1197 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 ITGB3P05106 788 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 DLATP10515 647 aaKnown RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 ODC1P11926 461 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 TNNI1P19237 187 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 OR1D2P34982 312 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 HOXD13P35453 343 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 TAF6P49848 677 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 YWHAHQ04917 246 aaPredicted RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 ZP2Q05996 745 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 ITIH3Q06033 890 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 BFSP1Q12934 665 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 SV2CQ496J9 727 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 CTXN3Q4LDR2 81 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 TMEM184AQ6ZMB5 413 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 NT5DC4Q86YG4 428 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 LNX1Q8TBB1 728 aaPredicted RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 SLC22A17Q8WUG5 538 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 ERCC4Q92889 916 aaPredicted RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 SUSD3Q96L08 255 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 RIPOR3Q96MK2 946 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 MTMR12Q9C0I1 747 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 PIDD1Q9HB75 910 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 RXFP1Q9HBX9 757 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
NEK4-204ENST00000487068 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 OBSL1O75147 1896 aa11.04□□□□□ -0.64
NEK4-204ENST00000487068 DENND4CQ5VZ89 1909 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 PRRG1O14668 218 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 PPEF2O14830 753 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 TGFB1I1O43294 461 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 TGM5O43548 720 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 LILRB3O75022 631 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 GADD45BO75293 160 aaPredicted RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 EFEMP2O95967 443 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 POLR2BP30876 1174 aaKnown RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 ELF1P32519 619 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 MTHFRP42898 656 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 WNT7BP56706 349 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 SNRPFP62306 86 aaKnown RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 POU5F1Q01860 360 aaKnown RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 KCNC3Q14003 757 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 SURF1Q15526 300 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 ZBTB6Q15916 424 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 CEP135Q66GS9 1140 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 SYCE2Q6PIF2 218 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 METTL23Q86XA0 190 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 ADHFE1Q8IWW8 467 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 GPR65Q8IYL9 337 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 SMYD4Q8IYR2 804 aaPredicted RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 FRMD4BQ9Y2L6 1034 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 TIMM13Q9Y5L4 95 aaPredicted RBP11.03□□□□□ -0.64
NEK4-204ENST00000487068 MYO16Q9Y6X6 1858 aa11.03□□□□□ -0.64
NEK4-204ENST00000487068 CCDC195A0A1B0GUA6 201 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 RFPL2O75678 378 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 NR3C1P04150 777 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 C8AP07357 584 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 ADRB2P07550 413 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 PNPLA4P41247 253 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 LILRA4P59901 499 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 UBE2HP62256 183 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 CYP24A1Q07973 514 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
NEK4-204ENST00000487068 KCNB1Q14721 858 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 PPM1LQ5SGD2 360 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 ATAT1Q5SQI0 421 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 OVOS1Q6IE37 1185 aa11.02□□□□□ -0.65
NEK4-204ENST00000487068 CD300LGQ6UXG3 332 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms