RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PCDHGB2Q9Y5G2 931 aa4.85□□□□□ -1.63
PTCD3-216ENST00000487043 ACTL7AQ9Y615 435 aa4.85□□□□□ -1.63
PTCD3-216ENST00000487043 PMF1-BGLAPU3KQ54 211 aa4.85□□□□□ -1.63
PTCD3-216ENST00000487043 NUP155O75694 1391 aa4.85□□□□□ -1.63
PTCD3-216ENST00000487043 RICTORQ6R327 1708 aa4.85□□□□□ -1.63
PTCD3-216ENST00000487043 HECW2Q9P2P5 1572 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KDM5DQ9BY66 1539 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 A2MP01023 1474 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PZPP20742 1482 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MAGI2Q86UL8 1455 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 NT5C1B-RDH14C9J2C7 533 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 F8W8V4 182 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MYO1FO00160 1098 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 FOXN3O00409 490 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 WDHD1O75717 1129 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KLHL18O94889 574 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 IL18RAPO95256 599 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PLA2G1BP04054 148 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PARP1P09874 1014 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 TYRP1P17643 537 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 FPR1P21462 350 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PCSK1P29120 753 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 CRHR1P34998 444 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 CHKAP35790 457 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KIR2DL3P43628 341 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MRE11P49959 708 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 WNT3AP56704 352 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 ATP8B2P98198 1209 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PLP2Q04941 152 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 DUSP2Q05923 314 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MTM1Q13496 603 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 DAG1Q14118 895 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 ELF2Q15723 593 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PDCD2Q16342 344 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KLHDC7AQ5VTJ3 777 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 HIBCHQ6NVY1 386 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 SESTD1Q86VW0 696 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 ZNF354CQ86Y25 554 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 SMAP1Q8IYB5 467 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 TRMT2AQ8IZ69 625 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MDM1Q8TC05 714 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 CCT6BQ92526 530 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 TEPSINQ96N21 525 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 SIN3AQ96ST3 1273 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 P2RX7Q99572 595 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 UNKQ9C0B0 810 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 UBA5Q9GZZ9 404 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 KIAA1683Q9H0B3 1180 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 MRPL46Q9H2W6 279 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PRDM16Q9HAZ2 1276 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 SLAMF7Q9NQ25 335 aa4.84□□□□□ -1.63
PTCD3-216ENST00000487043 PIH1D1Q9NWS0 290 aaKnown RBP4.84□□□□□ -1.63
PTCD3-216ENST00000487043 ZMYM4Q5VZL5 1548 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 F2RL2O00254 374 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 DDX3XO00571 662 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 WNT10BO00744 389 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 APOL1O14791 398 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 TOX4O94842 621 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 GASTP01350 101 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 CD1AP06126 327 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 FTH1P19P0C7X4 201 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 GYPEP15421 78 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 TSHRP16473 764 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 PRDX5P30044 214 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 GUCY1A2P33402 732 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 KCNJ5P48544 419 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 CTXN1P60606 82 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 PMS2P11Q13670 270 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 ACAP1Q15027 740 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 RALBP1Q15311 655 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 PRAMEF14Q5SWL7 426 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 KRT40Q6A162 431 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 DCBLD1Q8N8Z6 715 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 LINC01356Q8N9X3 169 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 SUCLG2Q96I99 432 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 MRGPRX1Q96LB2 322 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 GNL3LQ9NVN8 582 aaKnown RBP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 NCDNQ9UBB6 729 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 PADI4Q9UM07 663 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
PTCD3-216ENST00000487043 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 EIF2AK4Q9P2K8 1649 aaKnown RBP4.83□□□□□ -1.64
PTCD3-216ENST00000487043 UNC13BO14795 1591 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 FRMPD1Q5SYB0 1578 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 ATP10AO60312 1499 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 ANKRD30BQ9BXX2 1392 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 A0A087WV62 115 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 hCG_1642624A0A1W2PR95 340 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 FGF18O76093 207 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-216ENST00000487043 RAP2AP10114 183 aa4.82□□□□□ -1.64
PTCD3-216ENST00000487043 HARSP12081 509 aaKnown RBP4.82□□□□□ -1.64
PTCD3-216ENST00000487043 IL2RBP14784 551 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms