RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 C1QBPQ07021 282 aaKnown RBP21.7■■□□□ 1.06
HPS3-206ENST00000486530 MAP2K5Q13163 448 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 GRIK4Q16099 956 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 PASD1Q8IV76 773 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 ZNF606Q8WXB4 792 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 SEC14L1Q92503 715 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 PLVAPQ9BX97 442 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 RAB17Q9H0T7 212 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 XYLT2Q9H1B5 865 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 PDZD7Q9H5P4 517 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 MRPL47Q9HD33 250 aaKnown RBP21.7■■□□□ 1.06
HPS3-206ENST00000486530 CISHQ9NSE2 258 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 ADAM22Q9P0K1 906 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 UTP11Q9Y3A2 253 aaKnown RBP21.7■■□□□ 1.06
HPS3-206ENST00000486530 NR2E1Q9Y466 385 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 SCINQ9Y6U3 715 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 AGPSO00116 658 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 TTI1O43156 1089 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 ECM2O94769 699 aaPredicted RBP21.69■■□□□ 1.06
HPS3-206ENST00000486530 VTNP04004 478 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 CFHP08603 1231 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAM153BP0C7A2 387 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 DHX34Q14147 1143 aaKnown RBP21.69■■□□□ 1.06
HPS3-206ENST00000486530 HLTFQ14527 1009 aaKnown RBP eCLIP21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAM153CQ494X1 144 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 TSEN2Q8NCE0 465 aaKnown RBP21.69■■□□□ 1.06
HPS3-206ENST00000486530 USP6NLQ92738 828 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAXDC2Q96IV6 333 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 C11orf70Q9BRQ4 267 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAM153AQ9UHL3 310 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 MYO1FO00160 1098 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 HSF2BPO75031 334 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 RNF40O75150 1001 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 PHF2O75151 1096 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 LSM8O95777 96 aaKnown RBP21.69■■□□□ 1.06
HPS3-206ENST00000486530 STAG3L1P0CL83 205 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 IRF5Q13568 498 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 TRADDQ15628 312 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 AADACL2Q6P093 401 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 TMEM192Q8IY95 271 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 NLRP7Q8WX94 980 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 ERVK-5Q9HDB9 667 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAM114A2Q9NRY5 505 aa21.69■■□□□ 1.06
HPS3-206ENST00000486530 ABT1Q9ULW3 272 aaKnown RBP21.69■■□□□ 1.06
HPS3-206ENST00000486530 FAM187AA6NFU0 413 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 PYGMP11217 842 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 CD58P19256 250 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 ECHS1P30084 290 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 CHRNA3P32297 505 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 ASPAP45381 313 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 DR1Q01658 176 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 ADAT2Q7Z6V5 191 aaKnown RBP21.68■■□□□ 1.06
HPS3-206ENST00000486530 CPNE8Q86YQ8 564 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 EXOC4Q96A65 974 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 PPP1R16BQ96T49 567 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 RUFY1Q96T51 708 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 ADAM21Q9UKJ8 722 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 CITO14578 2027 aa21.68■■□□□ 1.06
HPS3-206ENST00000486530 TOMM70O94826 608 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 ARF4P18085 180 aaPredicted RBP21.67■■□□□ 1.06
HPS3-206ENST00000486530 GUCY2FP51841 1108 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 PLEKHA7Q6IQ23 1121 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 ZNF410Q86VK4 478 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 SLC13A5Q86YT5 568 aaPredicted RBP21.67■■□□□ 1.06
HPS3-206ENST00000486530 ZBTB9Q96C00 473 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 SCLT1Q96NL6 688 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 ZIC5Q96T25 663 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 CELF4Q9BZC1 486 aaKnown RBP21.67■■□□□ 1.06
HPS3-206ENST00000486530 ASB7Q9H672 318 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 ZFYVE28Q9HCC9 887 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 FLRT1Q9NZU1 646 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 MTUS1Q9ULD2 1270 aa21.67■■□□□ 1.06
HPS3-206ENST00000486530 ADCY6O43306 1168 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 NFICP08651 508 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 TM4SF4P48230 202 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 PTP4A2Q12974 167 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 PRAMEF19Q5SWL8 479 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 MARCH8Q5T0T0 291 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 MMS22LQ6ZRQ5 1243 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 CPB2Q96IY4 423 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 ZNF518BQ9C0D4 1074 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 RASAL2Q9UJF2 1139 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 GJD2Q9UKL4 321 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 DOCK3Q8IZD9 2030 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 RALGAPA2Q2PPJ7 1873 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 RRN3P2A6NIE6 340 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 LACTBL1A8MY62 500 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 OPA1O60313 960 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 CSDE1O75534 798 aaKnown RBP21.66■■□□□ 1.06
HPS3-206ENST00000486530 PROSCO94903 275 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 ERLIN2O94905 339 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 HSPA9P38646 679 aaKnown RBP21.66■■□□□ 1.06
HPS3-206ENST00000486530 MAMLD1Q13495 774 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 SCARA5Q6ZMJ2 495 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 PRELID2Q8N945 189 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 C1orf127Q8N9H9 656 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 RUNDC3BQ96NL0 473 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 SH3GL2Q99962 352 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 SIX4Q9UIU6 781 aa21.66■■□□□ 1.06
HPS3-206ENST00000486530 PCDHGC3Q9UN70 934 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms