RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 TMC7Q7Z402 723 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 AOPEPQ8N6M6 819 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 GAS2L1Q99501 681 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 ENTPD7Q9NQZ7 604 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 FANCLQ9NW38 375 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 MTCH2Q9Y6C9 303 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 TSC2P49815 1807 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 HIDE1A8MVS5 230 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 M0QZQ0 153 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 FGFR3P22607 806 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 GTF2H1P32780 548 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 ZNF165P49910 485 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 MYL5Q02045 173 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 DSG1Q02413 1049 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 ELAVL2Q12926 359 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 TRPC3Q13507 836 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 NCOA4Q13772 614 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 PTPROQ16827 1216 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 USP41Q3LFD5 358 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 KIAA0319Q5VV43 1072 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 DHX40Q8IX18 779 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 TAS1R2Q8TE23 839 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 RIN2Q8WYP3 895 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 ZNF560Q96MR9 790 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 XYLT2Q9H1B5 865 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 HSD3B7Q9H2F3 369 aa16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
RPUSD3-217ENST00000485705 KPNA7A9QM74 516 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 TRAPPC3O43617 180 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 LILRB3O75022 631 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 URODP06132 367 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 CA8P35219 290 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 PNPLA4P41247 253 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 GLUD2P49448 558 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 MXI1P50539 228 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 IQCB1Q15051 598 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 SV2CQ496J9 727 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 CDKAL1Q5VV42 579 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 KIAA1841Q6NSI8 718 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 MRPL43Q8N983 215 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 BPIFA3Q9BQP9 254 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 TTPALQ9BTX7 342 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 CBX8Q9HC52 389 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-217ENST00000485705 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 KCNJ18B7U540 433 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 CYB561D2O14569 222 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 SYN3O14994 580 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 MTIF2P46199 727 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 FMO5P49326 533 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 KCNJ12Q14500 433 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 SMC1AQ14683 1233 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 KRT39Q6A163 491 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 FAM114A1Q8IWE2 563 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 NGRNQ9NPE2 291 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 LMCD1Q9NZU5 365 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 POLIQ9UNA4 740 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 SNX9Q9Y5X1 595 aa16.65■□□□□ 0.26
RPUSD3-217ENST00000485705 PRUNE2Q8WUY3 3088 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 PER2O15055 1255 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 STX10O60499 249 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 AFPP02771 609 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 CNPP09543 421 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 FOSL2P15408 326 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 PDE12Q6L8Q7 609 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
RPUSD3-217ENST00000485705 RBM23Q86U06 439 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms