RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 EP400NLQ6ZTU2 488 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TRAPPC11Q7Z392 1133 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 CEP57Q86XR8 500 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 THEM5Q8N1Q8 247 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TTC39CQ8N584 583 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 MRPL43Q8N983 215 aaKnown RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 ENOX1Q8TC92 643 aaKnown RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TAF4BQ92750 862 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 HERC2P3Q9BVR0 1158 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 THAP9Q9H5L6 903 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TLE6Q9H808 572 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 AGAP1Q9UPQ3 857 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TDRD15B5MCY1 1934 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 RALGAPA2Q2PPJ7 1873 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 BECN2A8MW95 431 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 PRR33A8MZF0 331 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 KPNA7A9QM74 516 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 H3BQ06 376 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 PIRO00625 290 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 GRM6O15303 877 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 KIF4AO95239 1232 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 ITGB3P05106 788 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 LINC00271P0C7V0 271 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 CDK11BP21127 795 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 BMP6P22004 513 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 PBX3P40426 434 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 MTIF2P46199 727 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 STX17P56962 302 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TNNC1P63316 161 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 DSG1Q02413 1049 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TYRO3Q06418 890 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 NCOA4Q13772 614 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 NFKBIBQ15653 356 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 NAB2Q15742 525 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 DPCR1Q3MIW9 517 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 DCAF17Q5H9S7 520 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 KRT39Q6A163 491 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 DPH6Q7L8W6 267 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 ZC3H3Q8IXZ2 948 aaKnown RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TMEM86AQ8N2M4 240 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 SPATA18Q8TC71 538 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 RIN2Q8WYP3 895 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 HPDLQ96IR7 371 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 FAXDC2Q96IV6 333 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TMEM8AQ9HCN3 771 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 TUBGCP4Q9UGJ1 667 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 MAFFQ9ULX9 164 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.9□□□□□ -0.98
SF3A1-208ENST00000485618 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
SF3A1-208ENST00000485618 NCOR1O75376 2440 aa8.9□□□□□ -0.99
SF3A1-208ENST00000485618 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 ANO9A1A5B4 782 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 OR6C75A6NL08 312 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 CYB561D2O14569 222 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 P4HA2O15460 535 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 TYMPP19971 482 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 FGFR3P22607 806 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 EEF1GP26641 437 aaKnown RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 KLRC2P26717 231 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 POLR2BP30876 1174 aaKnown RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 LHX1P48742 406 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 CASP4P49662 377 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 NDUFV1P49821 464 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 MYL7Q01449 175 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 MYL5Q02045 173 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 YWHAHQ04917 246 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 SMARCB1Q12824 385 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 PUS10Q3MIT2 529 aaKnown RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 ZACNQ401N2 412 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 TCEAL5Q5H9L2 206 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 PLPP4Q5VZY2 271 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 RTL10Q7L3V2 364 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 EFCAB13Q8IY85 973 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 C1orf127Q8N9H9 656 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 FAM81BQ96LP2 452 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 POP1Q99575 1024 aaKnown RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 BPIFA3Q9BQP9 254 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 FAM124BQ9H5Z6 455 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-208ENST00000485618 GOLGA2P5Q9HBQ8 144 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 CHST7Q9NS84 486 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 MARCH5Q9NX47 278 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 GDAP2Q9NXN4 497 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 FNIP2Q9P278 1114 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 BACE2Q9Y5Z0 518 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 BDP1A6H8Y1 2624 aa8.89□□□□□ -0.99
SF3A1-208ENST00000485618 TRIM49BA6NDI0 452 aa8.88□□□□□ -0.99
SF3A1-208ENST00000485618 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
SF3A1-208ENST00000485618 C2orf71A6NGG8 1288 aa8.88□□□□□ -0.99
SF3A1-208ENST00000485618 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms