RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MFAP3P55082 362 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 CDK17Q00537 523 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 ASIC2Q16515 512 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 ASTE1Q2TB18 679 aaPredicted RBP15.6■□□□□ 0.09
LRIF1-202ENST00000485275 TSPAN18Q96SJ8 248 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 DESI2Q9BSY9 194 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 NUCKS1Q9H1E3 243 aaKnown RBP15.6■□□□□ 0.09
LRIF1-202ENST00000485275 HAUS4Q9H6D7 363 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 ELAC1Q9H777 363 aaKnown RBP15.6■□□□□ 0.09
LRIF1-202ENST00000485275 HMGXB4Q9UGU5 601 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF263O14978 683 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CYP26A1O43174 497 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ARHGAP6O43182 974 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ATICP31939 592 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CDH8P55286 799 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 PTK2Q05397 1052 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 GRIK3Q13003 919 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF667Q5HYK9 610 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 C16orf59Q7L2K0 433 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF571Q7Z3V5 609 aaPredicted RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 TMCO2Q7Z6W1 182 aaPredicted RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF280BQ86YH2 543 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 C7orf61Q8IZ16 206 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 LRRC52Q8N7C0 313 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 TAF4BQ92750 862 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 NHEJ1Q9H9Q4 299 aaPredicted RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 REXO2Q9Y3B8 237 aaKnown RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 NME7Q9Y5B8 376 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 A0A0U1RQJ8 604 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 USP27XA6NNY8 438 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 DDHD2O94830 711 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CD58P19256 250 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 TBXAS1P24557 533 aaPredicted RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 EIF4A3P38919 411 aaKnown RBP15.59■□□□□ 0.09
LRIF1-202ENST00000485275 EPHB4P54760 987 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 GLB1LQ6UWU2 654 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CD300LGQ6UXG3 332 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ENOSF1Q7L5Y1 443 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 SLC47A2Q86VL8 602 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 TMTC1Q8IUR5 882 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 KIAA1524Q8TCG1 905 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 SLC20A1Q8WUM9 679 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ATRIPQ8WXE1 791 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 ABHD8Q96I13 439 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CASD1Q96PB1 797 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 UBN1Q9NPG3 1134 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 SPTLC3Q9NUV7 552 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 CNTN6Q9UQ52 1028 aa15.59■□□□□ 0.09
LRIF1-202ENST00000485275 XPOTO43592 962 aaKnown RBP15.58■□□□□ 0.08
LRIF1-202ENST00000485275 SERPING1P05155 500 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 USP8P40818 1118 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 ZNF132P52740 706 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 DEFB103AP81534 67 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 DSC1Q08554 894 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 KLHL30Q0D2K2 578 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.08
LRIF1-202ENST00000485275 UPP1Q16831 310 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 TDRD12Q587J7 1177 aaKnown RBP15.58■□□□□ 0.08
LRIF1-202ENST00000485275 NOMO2Q5JPE7 1267 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 ACRBPQ8NEB7 543 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 EPS8L1Q8TE68 723 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 BADQ92934 168 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 TWNKQ96RR1 684 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 CISHQ9NSE2 258 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 SLC38A7Q9NVC3 462 aa15.58■□□□□ 0.08
LRIF1-202ENST00000485275 NOCTQ9UK39 431 aaKnown RBP15.58■□□□□ 0.08
LRIF1-202ENST00000485275 PODXLO00592 558 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 ITGB1P05556 798 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 FERP16591 822 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 SYN1P17600 705 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 LILRA4P59901 499 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 IKBKEQ14164 716 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 TMEM270Q6UE05 265 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 NOP9Q86U38 636 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 LNX1Q8TBB1 728 aaPredicted RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 WHAMMQ8TF30 809 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 ZNHIT6Q9NWK9 470 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 DNAJB4Q9UDY4 337 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 PCDHB7Q9Y5E2 793 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 HCRTO43612 131 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 NDUFA10O95299 355 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 KRT5P13647 590 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 KIF11P52732 1056 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 GFPT1Q06210 699 aaPredicted RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 ORC1Q13415 861 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 TUSC3Q13454 348 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 TSR1Q2NL82 804 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 PAN2Q504Q3 1202 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 NPAS4Q8IUM7 802 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 RBBP8NLQ8NC74 664 aaPredicted RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 DDX1Q92499 740 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 JAKMIP2Q96AA8 810 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms