RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 IKBKEQ14164 716 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 NAB2Q15742 525 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 MFSD5Q6N075 450 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCDC78-214ENST00000485091 TOGARAM2Q6ZUX3 1019 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 C7orf61Q8IZ16 206 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 TMEM199Q8N511 208 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 VWCEQ96DN2 955 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 CCDC42Q96M95 316 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 DESI2Q9BSY9 194 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 ACP6Q9NPH0 428 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 PRKAG2Q9UGJ0 569 aa18.73■□□□□ 0.59
CCDC78-214ENST00000485091 ANO9A1A5B4 782 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 PIRO00625 290 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 UPP2O95045 317 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 CALCAP01258 141 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
CCDC78-214ENST00000485091 GATMP50440 423 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 CDH8P55286 799 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 FAM71AQ8IYT1 594 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC78-214ENST00000485091 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 SNX9Q9Y5X1 595 aa18.72■□□□□ 0.59
CCDC78-214ENST00000485091 P4HA1P13674 534 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 IGFBP6P24592 240 aaPredicted RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 CLCNKBP51801 687 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 CDK17Q00537 523 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 PTK2Q05397 1052 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 GRIK3Q13003 919 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ZNF394Q53GI3 561 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 NOMO2Q5JPE7 1267 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 TMEM270Q6UE05 265 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ZNF571Q7Z3V5 609 aaPredicted RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ABI1Q8IZP0 508 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 LRRC52Q8N7C0 313 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 PAAF1Q9BRP4 392 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 SDCBP2Q9H190 292 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ELAC1Q9H777 363 aaKnown RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 CISHQ9NSE2 258 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 MKI67P46013 3256 aaKnown RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 PODXLO00592 558 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 CCDC172P0C7W6 258 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ACO1P21399 889 aaKnown RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 LRPAP1P30533 357 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 CLCN1P35523 988 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 TAF6P49848 677 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 SLC47A2Q86VL8 602 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 KIAA1524Q8TCG1 905 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 ZNF560Q96MR9 790 aa18.71■□□□□ 0.59
CCDC78-214ENST00000485091 TRMT1Q9NXH9 659 aaKnown RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 EPN1Q9Y6I3 576 aaPredicted RBP18.71■□□□□ 0.59
CCDC78-214ENST00000485091 SPTLC1O15269 473 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 AKR1B10O60218 316 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 NDUFA10O95299 355 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 CYLC1P35663 651 aaPredicted RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 PRKCIP41743 596 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 RNASELQ05823 741 aaKnown RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 FMNL3Q8IVF7 1028 aa18.7■□□□□ 0.58
CCDC78-214ENST00000485091 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 SEPT11Q9NVA2 429 aaKnown RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 BZW2Q9Y6E2 419 aaKnown RBP18.7■□□□□ 0.58
CCDC78-214ENST00000485091 FAM170AA1A519 330 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 SYN1P17600 705 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 KIF11P52732 1056 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 GFPT1Q06210 699 aaPredicted RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 SV2CQ496J9 727 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 ZNF280BQ86YH2 543 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 CCDC170Q8IYT3 715 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 RBBP8NLQ8NC74 664 aaPredicted RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 SLC20A1Q8WUM9 679 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 BADQ92934 168 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 BCO2Q9BYV7 579 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 SCN1AP35498 2009 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 SSU72P8A0A1W2PR75 194 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 KPNA7A9QM74 516 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 DDHD2O94830 711 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 PNPLA4P41247 253 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 LILRA4P59901 499 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 ORC1Q13415 861 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 PAN2Q504Q3 1202 aaKnown RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 NPAS4Q8IUM7 802 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 UBR7Q8N806 425 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 FAM193BQ96PV7 902 aaPredicted RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 TBC1D13Q9NVG8 400 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 ADAMTS1Q9UHI8 967 aa18.69■□□□□ 0.58
CCDC78-214ENST00000485091 PUF60Q9UHX1 559 aaKnown RBP18.69■□□□□ 0.58
CCDC78-214ENST00000485091 ALPK3Q96L96 1907 aa18.68■□□□□ 0.58
CCDC78-214ENST00000485091 ESPNB1AK53 854 aa18.68■□□□□ 0.58
CCDC78-214ENST00000485091 INPPL1O15357 1258 aa18.68■□□□□ 0.58
CCDC78-214ENST00000485091 CYP11B1P15538 503 aa18.68■□□□□ 0.58
CCDC78-214ENST00000485091 PDE6CP51160 858 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms