RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 MTMR12Q9C0I1 747 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 MAPK8IP1Q9UQF2 711 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 VCANP13611 3396 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 CCDC195A0A1B0GUA6 201 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 ANO9A1A5B4 782 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 PIRO00625 290 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 GADD45BO75293 160 aaPredicted RBP20.67■□□□□ 0.9
SNX17-206ENST00000484886 RFPL2O75678 378 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 C1RP00736 705 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 TNNC2P02585 160 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 ITGB3P05106 788 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 DLATP10515 647 aaKnown RBP20.67■□□□□ 0.9
SNX17-206ENST00000484886 POLR2BP30876 1174 aaKnown RBP20.67■□□□□ 0.9
SNX17-206ENST00000484886 TAF6P49848 677 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 YWHAHQ04917 246 aaPredicted RBP20.67■□□□□ 0.9
SNX17-206ENST00000484886 RAB33AQ14088 237 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 KCNB1Q14721 858 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 LILRA6Q6PI73 481 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 RSPO2Q6UXX9 243 aaPredicted RBP20.67■□□□□ 0.9
SNX17-206ENST00000484886 CSGALNACT2Q8N6G5 542 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 CCDC127Q96BQ5 260 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 FAM84AQ96KN4 292 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 SENP8Q96LD8 212 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 PIDD1Q9HB75 910 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 RMND1Q9NWS8 449 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 FBXW11Q9UKB1 542 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 AGAP1Q9UPQ3 857 aa20.67■□□□□ 0.9
SNX17-206ENST00000484886 ARHGEF37A1IGU5 675 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 SPTLC1O15269 473 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 PAX3P23760 479 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 AARSP49588 968 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNX17-206ENST00000484886 SV2CQ496J9 727 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 PPM1LQ5SGD2 360 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 GPR149Q86SP6 731 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 C12orf56Q8IXR9 622 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 SMG7Q92540 1137 aaKnown RBP20.66■□□□□ 0.9
SNX17-206ENST00000484886 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 TIGD1Q96MW7 591 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 POMKQ9H5K3 350 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 CD320Q9NPF0 282 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 FBXL5Q9UKA1 691 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 ITGA11Q9UKX5 1188 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 MTCL1Q9Y4B5 1905 aaKnown RBP20.66■□□□□ 0.9
SNX17-206ENST00000484886 NCOR1O75376 2440 aa20.66■□□□□ 0.9
SNX17-206ENST00000484886 PDXKO00764 312 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 CALUO43852 315 aaPredicted RBP20.65■□□□□ 0.9
SNX17-206ENST00000484886 C8AP07357 584 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 CPB1P15086 417 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 TNNI1P19237 187 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 ELF1P32519 619 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 PNPLA4P41247 253 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 ROR1Q01973 937 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 CYP24A1Q07973 514 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 BFSP1Q12934 665 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 OVOS1Q6IE37 1185 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 C15orf39Q6ZRI6 1047 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 METTL23Q86XA0 190 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 C1orf127Q8N9H9 656 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 CMASQ8NFW8 434 aaPredicted RBP20.65■□□□□ 0.9
SNX17-206ENST00000484886 SLC7A14Q8TBB6 771 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 FEZF2Q8TBJ5 459 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 ERCC4Q92889 916 aaPredicted RBP20.65■□□□□ 0.9
SNX17-206ENST00000484886 KCTD10Q9H3F6 313 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 INTS13Q9NVM9 706 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 ZDHHC7Q9NXF8 308 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 NR2E1Q9Y466 385 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 SCN1AP35498 2009 aa20.65■□□□□ 0.9
SNX17-206ENST00000484886 CYB561D2O14569 222 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 PRRG1O14668 218 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 ZMYND10O75800 440 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 NR3C1P04150 777 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 TYMPP19971 482 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 RBP5P82980 135 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 MRPL58Q14197 206 aaKnown RBP20.64■□□□□ 0.89
SNX17-206ENST00000484886 PSMD6Q15008 389 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 DUOXA2Q1HG44 320 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 SLC8B1Q6J4K2 584 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 CCDC149Q6ZUS6 474 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 WDR49Q8IV35 697 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 SMYD4Q8IYR2 804 aaPredicted RBP20.64■□□□□ 0.89
SNX17-206ENST00000484886 CGRRF1Q99675 332 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 DSEQ9UL01 958 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
SNX17-206ENST00000484886 PTPRJQ12913 1337 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 WDR27A2RRH5 827 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 C19orf67A6NJJ6 358 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 KPNA7A9QM74 516 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
SNX17-206ENST00000484886 CEP135Q66GS9 1140 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 GUF1Q8N442 669 aaKnown RBP20.63■□□□□ 0.89
SNX17-206ENST00000484886 OR5B17Q8NGF7 314 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 ZNF461Q8TAF7 563 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 PRKD2Q9BZL6 878 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 FRMD4BQ9Y2L6 1034 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 C2orf16Q68DN1 1984 aa20.63■□□□□ 0.89
SNX17-206ENST00000484886 OR6C75A6NL08 312 aa20.62■□□□□ 0.89
SNX17-206ENST00000484886 CCL16O15467 120 aa20.62■□□□□ 0.89
SNX17-206ENST00000484886 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms