RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ERVK-21P61565 698 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 RAD51AP2Q09MP3 1159 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 PRPF4BQ13523 1007 aaKnown RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 GIT2Q14161 759 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 DUOXA2Q1HG44 320 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 AXDND1Q5T1B0 1012 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 LCE3BQ5TA77 95 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 ADALQ6DHV7 355 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 SHC4Q6S5L8 630 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 DAW1Q8N136 415 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 MYCT1Q8N699 235 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 PDILTQ8N807 584 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 CEP120Q8N960 986 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 RNF169Q8NCN4 708 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 SLC17A8Q8NDX2 589 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 BSNDQ8WZ55 320 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 FAM46AQ96IP4 442 aaKnown RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 TRIM6Q9C030 488 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 TMEM117Q9H0C3 514 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 PCDHB2Q9Y5E7 798 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 DNAH12Q6ZR08 3092 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 DOCK5Q9H7D0 1870 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 NPHP3-ACAD11A0A0J9YXS1 232 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 LCHNA4D1U4 455 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 TBKBP1A7MCY6 615 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 N4BP3O15049 544 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 PRKCBP05771 671 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ITGA4P13612 1032 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ARF4P18085 180 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-207ENST00000483969 CMA1P23946 247 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 BMPR1AP36894 532 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 STRN3Q13033 797 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 MAPK7Q13164 816 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
COL8A1-207ENST00000483969 RESP18Q5W5W9 173 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 SLC27A1Q6PCB7 646 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 GLB1LQ6UWU2 654 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ARNTL2Q8WYA1 636 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 MYRFLQ96LU7 910 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 CDX2Q99626 313 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-207ENST00000483969 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ADPGKQ9BRR6 497 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ADAM19Q9H013 955 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 CERS4Q9HA82 394 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 PARVGQ9HBI0 331 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 PDE4DIPQ5VU43 2346 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 ADGRA3Q8IWK6 1321 aa9.78□□□□□ -0.84
COL8A1-207ENST00000483969 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 H3BRJ5 948 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 RBAK-RBAKDNI3L0D1 243 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 SLC16A4O15374 487 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 POLR2DO15514 142 aaKnown RBP9.77□□□□□ -0.85
COL8A1-207ENST00000483969 FGFR1P11362 822 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 GAP43P17677 238 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 GRIK1P39086 918 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 ZNF131P52739 623 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 PAN2Q504Q3 1202 aaKnown RBP9.77□□□□□ -0.85
COL8A1-207ENST00000483969 NAALADL2Q58DX5 795 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 DYMQ7RTS9 669 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 ZNF438Q7Z4V0 828 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 TMEM192Q8IY95 271 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 CEP57L1Q8IYX8 460 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 LRRC15Q8TF66 581 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 DHX58Q96C10 678 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 CASD1Q96PB1 797 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 TCHPQ9BT92 498 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
COL8A1-207ENST00000483969 MRPL4Q9BYD3 311 aaKnown RBP9.77□□□□□ -0.85
COL8A1-207ENST00000483969 CCDC113Q9H0I3 377 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 TNMDQ9H2S6 317 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 MAGEF1Q9HAY2 307 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.85
COL8A1-207ENST00000483969 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 SEL1LQ9UBV2 794 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 KCNH3Q9ULD8 1083 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 CNTNAP2Q9UHC6 1331 aa9.77□□□□□ -0.85
COL8A1-207ENST00000483969 A0A087X0B3 334 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 A0A1W2PQ27 194 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 A0A1W2PQ64 194 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 A0A1W2PQD8 194 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 MYMKA6NI61 221 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 B4GALT5O43286 388 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 OFD1O75665 1012 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 NPTXRO95502 500 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 TGFB1P01137 390 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 IDEP14735 1019 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 CDC25BP30305 580 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 NCKAP1LP55160 1127 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms