RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 DCLRE1AQ6PJP8 1040 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 PRSS55Q6UWB4 352 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-210ENST00000483417 CYP26C1Q6V0L0 522 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 SPATA31D4Q6ZUB0 917 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 PALB2Q86YC2 1186 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 IRF2BP1Q8IU81 584 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 C12orf56Q8IXR9 622 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 GPD1LQ8N335 351 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 TRIML1Q8N9V2 468 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 MLKLQ8NB16 471 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 XXYLT1Q8NBI6 393 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 RIN2Q8WYP3 895 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-210ENST00000483417 PIK3R5Q8WYR1 880 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 ZNF707Q96C28 371 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-210ENST00000483417 BORCS6Q96GS4 357 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 MFSD14AQ96MC6 490 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 CLSTN3Q9BQT9 956 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 CCDC94Q9BW85 323 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-210ENST00000483417 RPF1Q9H9Y2 349 aaKnown RBP10.41□□□□□ -0.74
HMG20B-210ENST00000483417 GOLGA2P5Q9HBQ8 144 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 MAN1C1Q9NR34 630 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 HCN4Q9Y3Q4 1203 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 TECTAO75443 2155 aa10.41□□□□□ -0.74
HMG20B-210ENST00000483417 PLXNA3P51805 1871 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SF3B1O75533 1304 aaKnown RBP eCLIP10.4□□□□□ -0.749e-6■■■■■ 68.9
HMG20B-210ENST00000483417 UBE4BO95155 1302 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 PTPRJQ12913 1337 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 CCDC195A0A1B0GUA6 201 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 ZNF233A6NK53 670 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 ADAM12O43184 909 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 EXOC3O60645 756 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 LRRN2O75325 713 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 RFPL2O75678 378 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 GLUD1P00367 558 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 NFICP08651 508 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 KCNE1P15382 129 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 RPL17P18621 184 aaKnown RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 FGFR3P22607 806 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 ABCD1P33897 745 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 CLCNKBP51801 687 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SNRPFP62306 86 aaKnown RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 TYRO3Q06418 890 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 UPP1Q16831 310 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SKOR2Q2VWA4 1001 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 JADE1Q6IE81 842 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SASS6Q6UVJ0 657 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 HS2ST1Q7LGA3 356 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 ZC3H3Q8IXZ2 948 aaKnown RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 EFCAB13Q8IY85 973 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 KREMEN2Q8NCW0 462 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 OR5B17Q8NGF7 314 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 HASPINQ8TF76 798 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 ELMO3Q96BJ8 720 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 CCDC127Q96BQ5 260 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SNX27Q96L92 541 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 TTPALQ9BTX7 342 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 SRRTQ9BXP5 876 aaKnown RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 DNAJC25Q9H1X3 360 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 WDR6Q9NNW5 1121 aaKnown RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 TOPORSQ9NS56 1045 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-210ENST00000483417 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 TRIOO75962 3097 aa10.4□□□□□ -0.74
HMG20B-210ENST00000483417 DENND4AQ7Z401 1863 aa10.4□□□□□ -0.75
HMG20B-210ENST00000483417 PPEF2O14830 753 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 N4BP1O75113 896 aaKnown RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 B3GAT3O94766 335 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 CST3P01034 146 aaPredicted RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 ASGR2P07307 311 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 NR2F2P24468 414 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 CYP24A1Q07973 514 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 PAK1Q13153 545 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 SNRNP35Q16560 246 aaKnown RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 NFIL3Q16649 462 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 HSP90AA4PQ58FG1 418 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 APBB1IPQ7Z5R6 666 aaPredicted RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 UBALD2Q8IYN6 164 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 TMEM174Q8WUU8 243 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 FAM122AQ96E09 287 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 SMOC2Q9H3U7 446 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 RBAKQ9NYW8 714 aaPredicted RBP10.39□□□□□ -0.75
HMG20B-210ENST00000483417 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 TUBGCP4Q9UGJ1 667 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 RWDD2AQ9UIY3 292 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 SORCS3Q9UPU3 1222 aa10.39□□□□□ -0.75
HMG20B-210ENST00000483417 PSMA7O14818 248 aa10.38□□□□□ -0.75
HMG20B-210ENST00000483417 TBC1D4O60343 1298 aa10.38□□□□□ -0.75
HMG20B-210ENST00000483417 ZMYND10O75800 440 aa10.38□□□□□ -0.75
HMG20B-210ENST00000483417 KIF20AO95235 890 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms