RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MRPL4Q9BYD3 311 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SLITRK6Q9H5Y7 841 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 TMEM134Q9H6X4 195 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 TRPV4Q9HBA0 871 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ASAH2Q9NR71 780 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SEMA4GQ9NTN9 838 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 RBM12Q9NTZ6 932 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 AFF4Q9UHB7 1163 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 KIAA1024Q9UPX6 916 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ACACBO00763 2458 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 NCANO14594 1321 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 FANCMQ8IYD8 2048 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 NOTCH4Q99466 2003 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 SLC38A8A6NNN8 435 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 ARNTLO00327 626 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MEFVO15553 781 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 GDF9O60383 454 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 LRP3O75074 770 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MCF2P10911 925 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 HARSP12081 509 aaKnown RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 CPB1P15086 417 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MUTP22033 750 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 HOXC13P31276 330 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 SOX9P48436 509 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 KPNA1P52294 538 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 EPHA5P54756 1037 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MLLT6P55198 1093 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 CSRP2Q16527 193 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 ST3GAL2Q16842 350 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 SEZ6Q53EL9 994 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 HAUS3Q68CZ6 603 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 RNF19BQ6ZMZ0 732 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 PRR23CQ6ZRP0 262 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 TAS1R3Q7RTX0 852 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 DAW1Q8N136 415 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 SPEM1Q8N4L4 309 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 APPL2Q8NEU8 664 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 TTC8Q8TAM2 541 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 SHKBP1Q8TBC3 707 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 E2F7Q96AV8 911 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 PGLYRP2Q96PD5 576 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 GPR88Q9GZN0 384 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 KMT5AQ9NQR1 393 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 DDX19AQ9NUU7 478 aaKnown RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 CNTN3Q9P232 1028 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MAFFQ9ULX9 164 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 TIMM13Q9Y5L4 95 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-206ENST00000483030 F5P12259 2224 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 MYH15Q9Y2K3 1946 aa8.07□□□□□ -1.12
CSDE1-206ENST00000483030 ARID2Q68CP9 1835 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 A0A1W2PRU2 124 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 E9PMD0 336 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 K7ESF4 209 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 ABLIM1O14639 778 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 CHADO15335 359 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 SLC16A4O15374 487 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 HIP1RO75146 1068 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 VNN2O95498 520 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 OR4Q2P0C623 313 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 PROZP22891 400 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 CNR2P34972 360 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 ANAPC15P60006 121 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 SPAG1Q07617 926 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 DUSP4Q13115 394 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 PTGDRQ13258 359 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 DMP1Q13316 513 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-206ENST00000483030 LRRC32Q14392 662 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 SLC10A6Q3KNW5 377 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 TTC38Q5R3I4 469 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 STXBP5Q5T5C0 1151 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 Q6ZS52 159 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 CEP68Q76N32 757 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 LONP2Q86WA8 852 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 ARID3BQ8IVW6 561 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-206ENST00000483030 FAM160A2Q8N612 972 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-206ENST00000483030 C4orf32Q8N8J7 132 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 BEST2Q8NFU1 509 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 FAM200AQ8TCP9 573 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 LRRC3BQ96PB8 259 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 LRRC3Q9BY71 257 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 C8orf33Q9H7E9 229 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-206ENST00000483030 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 ARHGAP28Q9P2N2 729 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 TUBGCP4Q9UGJ1 667 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 PCDHB8Q9UN66 801 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 DNM3Q9UQ16 869 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
CSDE1-206ENST00000483030 YIPF1Q9Y548 306 aa8.06□□□□□ -1.12
CSDE1-206ENST00000483030 PHLPP2Q6ZVD8 1323 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 MYBPHLA2RUH7 354 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms