RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 TMCO2Q7Z6W1 182 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 LRRC52Q8N7C0 313 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 TOP1MTQ969P6 601 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 PAAF1Q9BRP4 392 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 GPR88Q9GZN0 384 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 TBC1D13Q9NVG8 400 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 ZNHIT6Q9NWK9 470 aaKnown RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 TBKBP1A7MCY6 615 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 F8VZ95 297 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 HOXA2O43364 376 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 EFCAB14O75071 495 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 DDHD2O94830 711 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 TBXAS1P24557 533 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 IGFBP6P24592 240 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 STAT1P42224 750 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 EPHB4P54760 987 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 WDR5P61964 334 aaKnown RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 TUSC3Q13454 348 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 FAM117BQ6P1L5 589 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 ENOSF1Q7L5Y1 443 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 FAM81BQ96LP2 452 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 FAM193BQ96PV7 902 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-205ENST00000482968 MMS19Q96T76 1030 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 VRTNQ9H8Y1 702 aa16.13■□□□□ 0.17
PHGDH-205ENST00000482968 ZBBXA8MT70 800 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 PODXLO00592 558 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 GFPT2O94808 682 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 BAIAP3O94812 1187 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 STAU1O95793 577 aaKnown RBP16.12■□□□□ 0.17
PHGDH-205ENST00000482968 SKILP12757 684 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
PHGDH-205ENST00000482968 SOX5P35711 763 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 LILRA4P59901 499 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 TNNC1P63316 161 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 LTBP2Q14767 1821 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 UPP1Q16831 310 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 WDR59Q6PJI9 974 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 BAG1Q99933 345 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-205ENST00000482968 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-205ENST00000482968 KCNF1Q9H3M0 494 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 SNX9Q9Y5X1 595 aa16.12■□□□□ 0.17
PHGDH-205ENST00000482968 KPNA7A9QM74 516 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 SPTLC1O15269 473 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 B4GALT3O60512 393 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 DGKIO75912 1065 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 P4HA1P13674 534 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 PNPLA4P41247 253 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 ASPAP45381 313 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 RAP1GAPP47736 663 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 KCNJ6P48051 423 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 TAF6P49848 677 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 CDH8P55286 799 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 PAN2Q504Q3 1202 aaKnown RBP16.11■□□□□ 0.17
PHGDH-205ENST00000482968 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 SHC3Q92529 594 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-205ENST00000482968 DDX27Q96GQ7 796 aaKnown RBP16.11■□□□□ 0.17
PHGDH-205ENST00000482968 ZNF560Q96MR9 790 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 CHP1Q99653 195 aa16.11■□□□□ 0.17
PHGDH-205ENST00000482968 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.171e-8■■■■□ 22.4
PHGDH-205ENST00000482968 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-205ENST00000482968 B3GAT3O94766 335 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 KRT5P13647 590 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 CD58P19256 250 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
PHGDH-205ENST00000482968 ASIC2Q16515 512 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 SV2CQ496J9 727 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 IRF2BP2Q7Z5L9 587 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 COLGALT2Q8IYK4 626 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 C3orf58Q8NDZ4 430 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 DNAJB4Q9UDY4 337 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 FNDC1Q4ZHG4 1894 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-205ENST00000482968 OR1G1P47890 313 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 CCZ1BP86790 482 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 CCZ1P86791 482 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-205ENST00000482968 DSC1Q08554 894 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 TMEM139Q8IV31 216 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 FAM71AQ8IYT1 594 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 JAKMIP2Q96AA8 810 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 UROC1Q96N76 676 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 BCO2Q9BYV7 579 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 SDCBP2Q9H190 292 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 NRDE2Q9H7Z3 1164 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 CISHQ9NSE2 258 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 HCSTQ9UBK5 93 aa16.1■□□□□ 0.17
PHGDH-205ENST00000482968 CYP26A1O43174 497 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-205ENST00000482968 FERP16591 822 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 ACO1P21399 889 aaKnown RBP16.09■□□□□ 0.17
PHGDH-205ENST00000482968 KLHL30Q0D2K2 578 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms