RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PDXDC1Q6P996 788 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
CCM2-215ENST00000482714 RNF168Q8IYW5 571 aaPredicted RBP16.49■□□□□ 0.23
CCM2-215ENST00000482714 APPL2Q8NEU8 664 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 TAS1R2Q8TE23 839 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 C17orf80Q9BSJ5 609 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 OXCT2Q9BYC2 517 aaPredicted RBP16.49■□□□□ 0.23
CCM2-215ENST00000482714 LMAN2LQ9H0V9 348 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 MARCH5Q9NX47 278 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 HCSTQ9UBK5 93 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 NT5C1B-RDH14C9J2C7 533 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 KIF4AO95239 1232 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 SERPINC1P01008 464 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 SOD2P04179 222 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TYMPP19971 482 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 MYL6P60660 151 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 USP41Q3LFD5 358 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TIGD5Q53EQ6 642 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 ZNF667Q5HYK9 610 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 DSTYKQ6XUX3 929 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.48■□□□□ 0.23
CCM2-215ENST00000482714 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 FBXO22Q8NEZ5 403 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 VPS16Q9H269 839 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
CCM2-215ENST00000482714 CHST7Q9NS84 486 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 LGALS16A8MUM7 142 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 SOX1O00570 391 aaPredicted RBP16.48■□□□□ 0.23
CCM2-215ENST00000482714 CYP11A1P05108 521 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TPM3P06753 285 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 PIK3CAP42336 1068 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 FANCCQ00597 558 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 GPM6BQ13491 265 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 NR1I3Q14994 352 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 LIMS2Q7Z4I7 341 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 C3orf58Q8NDZ4 430 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 LMO3Q8TAP4 145 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 SENP8Q96LD8 212 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 DAAM1Q9Y4D1 1078 aa16.48■□□□□ 0.23
CCM2-215ENST00000482714 A0A1B0GTH6 734 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 CYB561D2O14569 222 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 PPEF2O14830 753 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 HUS1O60921 280 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 ITGB1P05556 798 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 FGFR3P22607 806 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 UBASH3AP57075 661 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 TMEM173Q86WV6 379 aaPredicted RBP16.47■□□□□ 0.23
CCM2-215ENST00000482714 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 GPR62Q9BZJ7 368 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 CYP3A43Q9HB55 503 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 NGRNQ9NPE2 291 aaKnown RBP16.47■□□□□ 0.23
CCM2-215ENST00000482714 IRAK3Q9Y616 596 aa16.47■□□□□ 0.23
CCM2-215ENST00000482714 PES1O00541 588 aaKnown RBP16.46■□□□□ 0.23
CCM2-215ENST00000482714 SPTLC1O15269 473 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 CBFA2T2O43439 604 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 TACC1O75410 805 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 OAZ2O95190 189 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 CTSAP10619 480 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 ODC1P11926 461 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 TBXAS1P24557 533 aaPredicted RBP16.46■□□□□ 0.23
CCM2-215ENST00000482714 PBX3P40426 434 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 TNNC1P63316 161 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 UBXN1Q04323 297 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 MRPL58Q14197 206 aaKnown RBP16.46■□□□□ 0.23
CCM2-215ENST00000482714 FAM171A1Q5VUB5 890 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 KIAA1841Q6NSI8 718 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 ENOSF1Q7L5Y1 443 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 METTL23Q86XA0 190 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 POF1BQ8WVV4 589 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 NT5C1BQ96P26 610 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCM2-215ENST00000482714 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 SNX9Q9Y5X1 595 aa16.46■□□□□ 0.23
CCM2-215ENST00000482714 A0A1W2PQC6 194 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 H7C4K7 107 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 C1RP00736 705 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 PON1P27169 355 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 BRCC3P46736 316 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms