RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 TCEAL5Q5H9L2 206 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 KIAA0319Q5VV43 1072 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 SMYD5Q6GMV2 418 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 KLHL10Q6JEL2 608 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 TTI2Q6NXR4 508 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 TMEM184AQ6ZMB5 413 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 RBM43Q6ZSC3 357 aaKnown RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 TRAPPC11Q7Z392 1133 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 FAM114A1Q8IWE2 563 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 SMYD4Q8IYR2 804 aaPredicted RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 TMEM86AQ8N2M4 240 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 MICALL1Q8N3F8 863 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 TTC39CQ8N584 583 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 EFHBQ8N7U6 833 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 MAFAQ8NHW3 353 aaPredicted RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 GPT2Q8TD30 523 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 ATXN2LQ8WWM7 1075 aaKnown RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 RIN2Q8WYP3 895 aaPredicted RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 PIK3R5Q8WYR1 880 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 CASP10Q92851 521 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 ERCC4Q92889 916 aaPredicted RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 HLA-CQ95604 372 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 PABPC5Q96DU9 382 aaKnown RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 HPDLQ96IR7 371 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 SUSD3Q96L08 255 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 CGRRF1Q99675 332 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 GPR62Q9BZJ7 368 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 MTMR12Q9C0I1 747 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 ZBP1Q9H171 429 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 IKZF4Q9H2S9 585 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 PLEKHA4Q9H4M7 779 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 FAM124BQ9H5Z6 455 aaPredicted RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 RXFP1Q9HBX9 757 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 MARCH5Q9NX47 278 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 GDAP2Q9NXN4 497 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 HCSTQ9UBK5 93 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 KIAA0100Q14667 2235 aaKnown RBP4.9□□□□□ -1.63
SHANK2-216ENST00000482659 CENPFP49454 3210 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 BRCA2P51587 3418 aa4.9□□□□□ -1.63
SHANK2-216ENST00000482659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 SMTNL1A8MU46 457 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 C2CD2LO14523 706 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CYB561D2O14569 222 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 PMM2O15305 246 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 P4HA2O15460 535 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TEX28O15482 410 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 MEFVO15553 781 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 B4GALT3O60512 393 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 OAZ2O95190 189 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 C4BPAP04003 597 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CYP11A1P05108 521 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TPM2P07951 284 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 BMP6P22004 513 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 DNAJB1P25685 340 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 PCSK1P29120 753 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 POLR2BP30876 1174 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ELF1P32519 619 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 IRS1P35568 1242 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 NRIP1P48552 1158 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CASP4P49662 377 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 MARSP56192 900 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 MYL7Q01449 175 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ITIH3Q06033 890 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 SOX4Q06945 474 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 HYAL1Q12794 435 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ADAM15Q13444 863 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 NCOA4Q13772 614 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 RAB33AQ14088 237 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 COL19A1Q14993 1142 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 PTPN14Q15678 1187 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 MAPRE1Q15691 268 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CCDC85BQ15834 202 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 PSMD5Q16401 504 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 NFE2Q16621 373 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 STX1AQ16623 288 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CTC1Q2NKJ3 1217 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ZACNQ401N2 412 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CCDC40Q4G0X9 1142 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CTXN3Q4LDR2 81 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 WDR44Q5JSH3 913 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 VARS2Q5ST30 1063 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 LIN9Q5TKA1 542 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TCERG1LQ5VWI1 586 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 PLPP4Q5VZY2 271 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TPGS2Q68CL5 300 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 KRT39Q6A163 491 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 OVOS1Q6IE37 1185 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 SLC8B1Q6J4K2 584 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ZNF280DQ6N043 979 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CES5AQ6NT32 575 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 CCDC149Q6ZUS6 474 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 SV2AQ7L0J3 742 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TAS1R1Q7RTX1 841 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 SPRED2Q7Z698 418 aa4.89□□□□□ -1.63
SHANK2-216ENST00000482659 RBM23Q86U06 439 aaKnown RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 TMEM173Q86WV6 379 aaPredicted RBP4.89□□□□□ -1.63
SHANK2-216ENST00000482659 ZC3H3Q8IXZ2 948 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms