RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.37
TRAIP-208ENST00000482582 PCDHB12Q9Y5F1 795 aa12.71□□□□□ -0.37
TRAIP-208ENST00000482582 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
TRAIP-208ENST00000482582 SMTNL1A8MU46 457 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 TMEM189-UBE2V1I3L0A0 370 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 GRM6O15303 877 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 KRT19P08727 400 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 DNAJB1P25685 340 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 GTF2H1P32780 548 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 MTIF2P46199 727 aaKnown RBP12.7□□□□□ -0.38
TRAIP-208ENST00000482582 FMO5P49326 533 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 LILRA4P59901 499 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 MYL6P60660 151 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 RBP5P82980 135 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 BIRC3Q13489 604 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 KRT31Q15323 416 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
TRAIP-208ENST00000482582 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 SPPL3Q8TCT6 385 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 SEMA4DQ92854 862 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 PLVAPQ9BX97 442 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 TMEM8AQ9HCN3 771 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAIP-208ENST00000482582 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
TRAIP-208ENST00000482582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAIP-208ENST00000482582 BECN2A8MW95 431 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 H3BNC9 293 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 PHACTR2O75167 634 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 TADA2AO75478 443 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 CAVIN2O95810 425 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 RB1P06400 928 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
TRAIP-208ENST00000482582 MXI1P50539 228 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 AP3M2P53677 418 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 GPM6BQ13491 265 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 NCOA4Q13772 614 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 CAMK1Q14012 370 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 TIGD5Q53EQ6 642 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 KRT39Q6A163 491 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 FUT10Q6P4F1 479 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 USP37Q86T82 979 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-208ENST00000482582 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 B3GALT6Q96L58 329 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 SAMD11Q96NU1 681 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 TAB2Q9NYJ8 693 aa12.69□□□□□ -0.38
TRAIP-208ENST00000482582 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-208ENST00000482582 LIMA1Q9UHB6 759 aaKnown RBP12.69□□□□□ -0.38
TRAIP-208ENST00000482582 TSC2P49815 1807 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 STX10O60499 249 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 AFPP02771 609 aaKnown RBP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 PPM1AP35813 382 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 SPOPLQ6IQ16 392 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 DDX53Q86TM3 631 aaKnown RBP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 LMO3Q8TAP4 145 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 HLA-CQ95604 372 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 HPDLQ96IR7 371 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 SUSD3Q96L08 255 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 SENP8Q96LD8 212 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 VPS16Q9H269 839 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 PCDHGC5Q9Y5F6 944 aa12.68□□□□□ -0.38
TRAIP-208ENST00000482582 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-208ENST00000482582 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 KPNA7A9QM74 516 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 PMM2O15305 246 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 CSPG5O95196 566 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 TKTP29401 623 aaKnown RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 PIK3CAP42336 1068 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 TAF6P49848 677 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 COPB1P53618 953 aaKnown RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 ERVFC1P60507 584 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 MYL7Q01449 175 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 TRPC3Q13507 836 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 VPS52Q8N1B4 723 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 FBXL13Q8NEE6 735 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 AUTS2Q8WXX7 1259 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms