RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 OPTNQ96CV9 577 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 KCNK13Q9HB14 408 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 ANAPC7Q9UJX3 599 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 UBE4BO95155 1302 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 UMODL1Q5DID0 1318 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 PIK3CDO00329 1044 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 SLITRK3O94933 977 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 TROVE2P10155 538 aaKnown RBP eCLIP16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 PLS3P13797 630 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 CYP11B1P15538 503 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 KRT4P19013 534 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 SERPINB3P29508 390 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 CETN2P41208 172 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 CCNG2Q16589 344 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 CAPN12Q6ZSI9 719 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 TTC25Q96NG3 672 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 PCIF1Q9H4Z3 704 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
CNKSR1-207ENST00000482227 LTBP4Q8N2S1 1624 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 DNAJC6O75061 913 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 RARBP10826 455 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 MAPK4P31152 587 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 VAMP7P51809 220 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 ODR4Q5SWX8 454 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 TUBB6Q9BUF5 446 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 STRA6Q9BX79 667 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 ARHGEF4Q9NR80 690 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 WNK3Q9BYP7 1800 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 BMP3P12645 472 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 PPP2R5CQ13362 524 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 LIN52Q52LA3 116 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 TTC7BQ86TV6 843 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 TPH2Q8IWU9 490 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 ZSWIM2Q8NEG5 633 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 DDX1Q92499 740 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 SHC3Q92529 594 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 FOXP3Q9BZS1 431 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 SLC4A7Q9Y6M7 1214 aa16.43■□□□□ 0.22
CNKSR1-207ENST00000482227 CREB3O43889 395 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 SEL1LQ9UBV2 794 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 G3BP2Q9UN86 482 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 P4HA2O15460 535 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 SREBF1P36956 1147 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 CETN1Q12798 172 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 LSAMPQ13449 338 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 NFIXQ14938 502 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 ACAD10Q6JQN1 1059 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 IZUMO2Q6UXV1 221 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 ATXN10Q9UBB4 475 aa16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-207ENST00000482227 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 A8MXQ7 604 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 ZBED4O75132 1171 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 ZSCAN5DPP0CG00 497 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 ETS2P15036 469 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 CIITAP33076 1130 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 CDK7P50613 346 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 RAP1GDS1P52306 607 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 PICALMQ13492 652 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 KRT72Q14CN4 511 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 LLGL2Q6P1M3 1020 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TRIM74Q86UV6 250 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TRIM73Q86UV7 250 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TMEM117Q9H0C3 514 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 VCX3BQ9H321 246 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 VPS37BQ9H9H4 285 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 VCX3AQ9NNX9 186 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 RPS6KL1Q9Y6S9 549 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 ARFIP2P53365 341 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 CDK16Q00536 496 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 RASA2Q15283 850 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 PHLDB2Q86SQ0 1253 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms