RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 CALML4Q96GE6 196 aa7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 CDK5RAP3Q96JB5 506 aa7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 C16orf70Q9BSU1 422 aa7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 ZSWIM4Q9H7M6 989 aa7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 GABBR1Q9UBS5 961 aa7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 SRPRBQ9Y5M8 271 aaKnown RBP7.46□□□□□ -1.21
CTNNB1-213ENST00000482042 C17orf102A2RUQ5 167 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 VWA3AA6NCI4 1184 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SPTLC2O15270 562 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 MAGEB2O15479 319 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 CUTAO60888 179 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 CCNE2O96020 404 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 ESR1P03372 595 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 C8AP07357 584 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SRFP11831 508 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 GDNFP39905 211 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 UBA7P41226 1012 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 AFMP43652 599 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 RGS19P49795 217 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SOX10P56693 466 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SPIRE1Q08AE8 756 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 XKR3Q5GH77 459 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 FAM47CQ5HY64 1035 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 FAM43BQ6ZT52 329 aaPredicted RBP7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 CCDC60Q8IWA6 550 aaPredicted RBP7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 DTWD2Q8NBA8 298 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SLC43A3Q8NBI5 491 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 LINC00301Q8NCQ3 95 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 ATP8B4Q8TF62 1192 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 CCDC120Q96HB5 630 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 SPATA32Q96LK8 384 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 ALPK1Q96QP1 1244 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 USP28Q96RU2 1077 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 EIF2AK1Q9BQI3 630 aaKnown RBP7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 DUSP15Q9H1R2 295 aaPredicted RBP7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 TMEM60Q9H2L4 133 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 CLIC4Q9Y696 253 aa7.46□□□□□ -1.22
CTNNB1-213ENST00000482042 GBF1Q92538 1859 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 GREM1O60565 184 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 DNAJA2O60884 412 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CAND2O75155 1236 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 LYPLA2O95372 231 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 ZNF286BP0CG31 522 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 NCLP19338 710 aaKnown RBP7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 TMOD1P28289 359 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CCT6AP40227 531 aaKnown RBP7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CDK7P50613 346 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CDC42EP1Q00587 391 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 PLCB4Q15147 1175 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 PTPAQ15257 358 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 KCNMB1Q16558 191 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 UBE2Q1Q7Z7E8 422 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 RSPH3Q86UC2 560 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 RASSF8Q8NHQ8 419 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 KAT2BQ92831 832 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CCDC34Q96HJ3 373 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 LXNQ9BS40 222 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 GPR62Q9BZJ7 368 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CCSER1Q9C0I3 900 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 BCAS3Q9H6U6 928 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 ANKEF1Q9NU02 776 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 RCOR1Q9UKL0 485 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 NR2E3Q9Y5X4 410 aa7.45□□□□□ -1.22
CTNNB1-213ENST00000482042 CITO14578 2027 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CENPFP49454 3210 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 HTTP42858 3142 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 GOLGA6L4A6NEF3 574 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CHURC1-FNTBB4DL54 471 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 SLITRK3O94933 977 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CLTBP09497 229 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 SMIM10L2BP0DMW5 78 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 YWHABP31946 246 aaKnown RBP7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 EIF4A3P38919 411 aaKnown RBP7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 DNM2P50570 870 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 RTP1P59025 263 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CHMP4BP1P59074 171 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 PRKCEQ02156 737 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CEBPZQ03701 1054 aaKnown RBP7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 PPFIA1Q13136 1202 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 BFSP2Q13515 415 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 PKP1Q13835 747 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 HYIQ5T013 277 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 ADALQ6DHV7 355 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 TAF2Q6P1X5 1199 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 FAM173BQ6P4H8 233 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 CABP7Q86V35 215 aa7.44□□□□□ -1.22
CTNNB1-213ENST00000482042 TPH2Q8IWU9 490 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms