RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 KRT38O76015 456 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 IGFBP6P24592 240 aaPredicted RBP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 TUSC3Q13454 348 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 ECM1Q16610 540 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 HAUS3Q68CZ6 603 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 CWF19L1Q69YN2 538 aaKnown RBP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 FOXR1Q6PIV2 292 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 RIPOR1Q6ZS17 1223 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 SIX5Q8N196 739 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 FBXO18Q8NFZ0 1043 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 ZNF592Q92610 1267 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 STAMQ92783 540 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 ADPGKQ9BRR6 497 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 LLPHQ9BRT6 129 aaKnown RBP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 NT5C3AQ9H0P0 336 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 BHMT2Q9H2M3 363 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.82
HLA-B-253ENST00000481849 DUSP12Q9UNI6 340 aa9.9□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 PP2D1A8MPX8 630 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 E9PMD0 336 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 ACKR2O00590 384 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 CCL16O15467 120 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 ADAM12O43184 909 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 THP07101 528 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 RFX1P22670 979 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 NAMPTP43490 491 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 MCCD1P59942 119 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 OSTNP61366 133 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 NTHL1P78549 312 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 HMGN5P82970 282 aaKnown RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 ZRSR1Q15695 479 aaKnown RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 PSMD5Q16401 504 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 FAM187BQ17R55 369 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 NT5DC1Q5TFE4 455 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 ATF7IP2Q5U623 682 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 C4orf32Q8N8J7 132 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 CHAMP1Q96JM3 812 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 ZSCAN31Q96LW9 406 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 TTPALQ9BTX7 342 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 PLEKHA4Q9H4M7 779 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 DDX19AQ9NUU7 478 aaKnown RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 CUEDC1Q9NWM3 386 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-253ENST00000481849 FNIP2Q9P278 1114 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 CA14Q9ULX7 337 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 POLIQ9UNA4 740 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 PCDHB6Q9Y5E3 794 aa9.89□□□□□ -0.83
HLA-B-253ENST00000481849 WDR81Q562E7 1941 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 I3L4J1 428 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 NPR3P17342 541 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CDC25AP30304 524 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 GPC1P35052 558 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CLCN5P51795 746 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CLCNKBP51801 687 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 PEX3P56589 373 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CREMQ03060 361 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 SRSF11Q05519 484 aaKnown RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 ORC2Q13416 577 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 PPM1LQ5SGD2 360 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 LIN9Q5TKA1 542 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 ERICH6BQ5W0A0 696 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 LILRA6Q6PI73 481 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CYP26C1Q6V0L0 522 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 GRASPQ7Z6J2 395 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 SLC44A3Q8N4M1 653 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 LNX1Q8TBB1 728 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 HDAC7Q8WUI4 952 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 CLSTN3Q9BQT9 956 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 ZDHHC7Q9NXF8 308 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 IGSF9Q9P2J2 1179 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 EPS15L1Q9UBC2 864 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 LOC400499M0QZD8 3231 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 DSPP15924 2871 aaKnown RBP9.88□□□□□ -0.83
HLA-B-253ENST00000481849 ZMYM2Q9UBW7 1377 aa9.88□□□□□ -0.83
HLA-B-253ENST00000481849 SFI1A8K8P3 1242 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 K7ERI5 159 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 HIP1RO75146 1068 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 B3GAT3O94766 335 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 C8AP07357 584 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
HLA-B-253ENST00000481849 LAMP2P13473 410 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 AOC1P19801 751 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 OR1D2P34982 312 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 NBL1P41271 181 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 BRCC3P46736 316 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 EFNA5P52803 228 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 RAD51AP2Q09MP3 1159 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 NR1H3Q13133 447 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 NAB2Q15742 525 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 IL17AQ16552 155 aa9.87□□□□□ -0.83
HLA-B-253ENST00000481849 DCAF4L1Q3SXM0 396 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms