RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CCNE2O96020 404 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 MAP3K10Q02779 954 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 UGCGQ16739 394 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 CDR2LQ86X02 465 aaPredicted RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 MRPL9Q9BYD2 267 aaKnown RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 FOXN3O00409 490 aaPredicted RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 SETSIPP0DME0 302 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 SULT1E1P49888 294 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 GJB7Q6PEY0 223 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 TLR2O60603 784 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 HIRAP54198 1017 aaPredicted RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 BEX3Q00994 111 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 RWDD4Q6NW29 188 aaKnown RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 BRI3BPQ8WY22 251 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 CALCOCO1Q9P1Z2 691 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 NOC2LQ9Y3T9 749 aaKnown RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 CYP11B1P15538 503 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 GTF2F1P35269 517 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCM2-214ENST00000481194 PLTPP55058 493 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 EIF3BP55884 814 aaKnown RBP20.36■□□□□ 0.85
CCM2-214ENST00000481194 KIAA1755Q5JYT7 1200 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 EPAS1Q99814 870 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 ZNF831Q5JPB2 1677 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
CCM2-214ENST00000481194 CAPSQ13938 189 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 SLAIN1Q8ND83 568 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 PDGFRBP09619 1106 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 SERPINB6P35237 376 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 PTENP60484 403 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 BASP1P80723 227 aaKnown RBP20.36■□□□□ 0.85
CCM2-214ENST00000481194 KRT17Q04695 432 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 SEZ6Q53EL9 994 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 CFAP157Q5JU67 520 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 CENPUQ71F23 418 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 FAM71BQ8TC56 605 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 FMO2Q99518 471 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 KLK14Q9P0G3 267 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 LRRIQ3A6PVS8 624 aaPredicted RBP20.36■□□□□ 0.85
CCM2-214ENST00000481194 YWHAGP61981 247 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCM2-214ENST00000481194 ECM1Q16610 540 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 FBXO47Q5MNV8 452 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 ADGRF2Q8IZF7 708 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 CNPY4Q8N129 248 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 FEZF2Q8TBJ5 459 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 NAGPAQ9UK23 515 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 FBXL5Q9UKA1 691 aa20.36■□□□□ 0.85
CCM2-214ENST00000481194 ALDH7A1P49419 539 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 FLT3LGP49771 235 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 CRYBB1P53674 252 aaPredicted RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 LRRC55Q6ZSA7 311 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 SLC30A5Q8TAD4 765 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 CCDC97Q96F63 343 aaPredicted RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 UMODL1Q5DID0 1318 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 ATP1A1P05023 1023 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 PDGFRAP16234 1089 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 BRD2P25440 801 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 PPM1FP49593 454 aaPredicted RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 ALS2CLQ60I27 953 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 TMEM51Q9NW97 253 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 SNTG2Q9NY99 539 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 MAD1L1Q9Y6D9 718 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 ANKRD63C9JTQ0 380 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 GPD1P21695 349 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 MARSP56192 900 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 APOL1O14791 398 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 SH3TC2Q8TF17 1288 aa20.35■□□□□ 0.85
CCM2-214ENST00000481194 MRRFQ96E11 262 aaKnown RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 COL5A3P25940 1745 aaPredicted RBP20.35■□□□□ 0.85
CCM2-214ENST00000481194 TARSL2A2RTX5 802 aaKnown RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 CYB561D2O14569 222 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 JAG1P78504 1218 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 PDIK1LQ8N165 341 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 UROC1Q96N76 676 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 ACO2Q99798 780 aaKnown RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 MYL6P60660 151 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 TBX2Q13207 712 aaPredicted RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 ITPRIPL1Q6GPH6 555 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 CCDC13Q8IYE1 715 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 RNPC3Q96LT9 517 aaKnown RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 PARD6BQ9BYG5 372 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 KCTD10Q9H3F6 313 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 PAEPP09466 180 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 ARL1P40616 181 aaPredicted RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 BCAT1P54687 386 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 SETDB1Q15047 1291 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 C6orf163Q5TEZ5 329 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 USP38Q8NB14 1042 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCM2-214ENST00000481194 PCSK1NQ9UHG2 260 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 NCK2O43639 380 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 FBXO21O94952 628 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 ZNF131P52739 623 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 BCAR1P56945 870 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 ENPEPQ07075 957 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 ARSHQ5FYA8 562 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 RNF25Q96BH1 459 aaPredicted RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 TMEM176AQ96HP8 235 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms