RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 TMEM189-UBE2V1I3L0A0 370 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 DLL1O00548 723 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 LRRN2O75325 713 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 STAU1O95793 577 aaKnown RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 TNNC2P02585 160 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 AFPP02771 609 aaKnown RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 TMEM191BP0C7N4 346 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 BMPR1AP36894 532 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 SLC11A1P49279 550 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 AARSP49588 968 aaKnown RBP eCLIP10.34□□□□□ -0.75
CD46-214ENST00000480003 CLCNKBP51801 687 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 COPB1P53618 953 aaKnown RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 BCAR1P56945 870 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 RBP5P82980 135 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 SMAD3P84022 425 aaKnown RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 RNASELQ05823 741 aaKnown RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 KCNMA1Q12791 1236 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 NR1I3Q14994 352 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 LRIT3Q3SXY7 679 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 CBWD6Q4V339 395 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 CBWD3Q5JTY5 395 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 CBWD5Q5RIA9 395 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 TCERG1LQ5VWI1 586 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 KCNT2Q6UVM3 1135 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 RNF214Q8ND24 703 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 EHBP1Q8NDI1 1231 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 MTMR12Q9C0I1 747 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 VPS16Q9H269 839 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 CACNG4Q9UBN1 327 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 ITGA11Q9UKX5 1188 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 A0A1B0GTH6 734 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
CD46-214ENST00000480003 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 CASTOR2A6NHX0 329 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 NT5C1B-RDH14C9J2C7 533 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 GOLGA6L19H0YKK7 550 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 PODXLO00592 558 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 PPEF2O14830 753 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 TEX33O43247 280 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 HLA-DRAP01903 254 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 PAX3P23760 479 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 ATICP31939 592 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 ALDH7A1P49419 539 aaKnown RBP10.33□□□□□ -0.76
CD46-214ENST00000480003 LILRA4P59901 499 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 ERVK-21P61565 698 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 FANCCQ00597 558 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 SGSM1Q2NKQ1 1148 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 EPC2Q52LR7 807 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 DCAF17Q5H9S7 520 aaPredicted RBP10.33□□□□□ -0.76
CD46-214ENST00000480003 LIMS2Q7Z4I7 341 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 LRRC52Q8N7C0 313 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 COLGALT1Q8NBJ5 622 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 C3orf58Q8NDZ4 430 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 FBXL13Q8NEE6 735 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 TAS1R2Q8TE23 839 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 RABGGTAQ92696 567 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 COLEC11Q9BWP8 271 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 RAB20Q9NX57 234 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 TAB2Q9NYJ8 693 aa10.33□□□□□ -0.76
CD46-214ENST00000480003 ANK1P16157 1881 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 C5orf67F2Z3F1 127 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 F8W810 466 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 SPTLC1O15269 473 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 AP5Z1O43299 807 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 N4BP1O75113 896 aaKnown RBP10.32□□□□□ -0.76
CD46-214ENST00000480003 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
CD46-214ENST00000480003 ASS1P00966 412 aaKnown RBP10.32□□□□□ -0.76
CD46-214ENST00000480003 ITGB3P05106 788 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 RB1P06400 928 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 FAM163BP0C2L3 166 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 LAG3P18627 525 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 POLR2BP30876 1174 aaKnown RBP10.32□□□□□ -0.76
CD46-214ENST00000480003 OR1G1P47890 313 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 MXI1P50539 228 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 MYL6P60660 151 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 TPM4P67936 248 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 PLCB3Q01970 1234 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 TAP1Q03518 808 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 NCOA4Q13772 614 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 RAB30Q15771 203 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
CD46-214ENST00000480003 SLC39A11Q8N1S5 342 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 TAF4BQ92750 862 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 FAXDC2Q96IV6 333 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 ZNF558Q96NG5 402 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 PLVAPQ9BX97 442 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
CD46-214ENST00000480003 AAASQ9NRG9 546 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 MARCH5Q9NX47 278 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 GDAP2Q9NXN4 497 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms