RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 PRPF6O94906 941 aaKnown RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 GNA14O95837 355 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 ITGA4P13612 1032 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 KLRC2P26717 231 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 AP3M2P53677 418 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 FKBP3Q00688 224 aaKnown RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 TDGQ13569 410 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 ZBTB6Q15916 424 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 STX1AQ16623 288 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 EEF1DP3Q658K8 133 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 TTI2Q6NXR4 508 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 CRELD2Q6UXH1 353 aaPredicted RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 GPD1LQ8N335 351 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 TDRD5Q8NAT2 981 aaKnown RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 XXYLT1Q8NBI6 393 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 FAXDC2Q96IV6 333 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 UROC1Q96N76 676 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 MSTO1Q9BUK6 570 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 TRIM6Q9C030 488 aaPredicted RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 HAPLN2Q9GZV7 340 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 NXF3Q9H4D5 531 aaKnown RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 ZHX3Q9H4I2 956 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 SLC38A7Q9NVC3 462 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 ANO10Q9NW15 660 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 FNIP2Q9P278 1114 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 IGSF9Q9P2J2 1179 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 AGO2Q9UKV8 859 aaKnown RBP9.66□□□□□ -0.86
DDX56-211ENST00000479602 DUSP12Q9UNI6 340 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 SSX2IPQ9Y2D8 614 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 F5P12259 2224 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 TDRD15B5MCY1 1934 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 ANKRD63C9JTQ0 380 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 ANHXE9PGG2 379 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 XPOTO43592 962 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 STAU1O95793 577 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 AOC1P19801 751 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 LRPAP1P30533 357 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 SCNN1GP51170 649 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 YARSP54577 528 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 PPP2R3AQ06190 1150 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 PAK1Q13153 545 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 PSMD6Q15008 389 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 SNRNP35Q16560 246 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 ARMCX5Q6P1M9 558 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 CD300LGQ6UXG3 332 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 ASCL5Q7RTU5 278 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 SYCP3Q8IZU3 236 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 SLC44A3Q8N4M1 653 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 SPATA18Q8TC71 538 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 ENOX1Q8TC92 643 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 NOC3LQ8WTT2 800 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 POMGNT1Q8WZA1 660 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 NXPE3Q969Y0 559 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 BICD1Q96G01 975 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 BORCS6Q96GS4 357 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 ACAP3Q96P50 834 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 PPP1R10Q96QC0 940 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 TSG101Q99816 390 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 CXCL16Q9H2A7 254 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 PLEKHA4Q9H4M7 779 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 METTL14Q9HCE5 456 aaKnown RBP9.65□□□□□ -0.86
DDX56-211ENST00000479602 FAM86C1Q9NVL1 165 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 HSPBP1Q9NZL4 362 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 WNT16Q9UBV4 365 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 GDAQ9Y2T3 454 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
DDX56-211ENST00000479602 DOCK8Q8NF50 2099 aa9.65□□□□□ -0.87
DDX56-211ENST00000479602 CACNA1IQ9P0X4 2223 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CCDC195A0A1B0GUA6 201 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 KRBA1A5PL33 1030 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 PTGESO14684 152 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 TGM5O43548 720 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 RFPL2O75678 378 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 RECQL4O94761 1208 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 NPTXRO95502 500 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 FGFR1OPO95684 399 aaKnown RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 NR3C1P04150 777 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 ADH1AP07327 375 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CCDC192P0DO97 292 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 AKAP5P24588 427 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 GTF2H1P32780 548 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 RPL9P32969 192 aaKnown RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 MLH1P40692 756 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 GLUD2P49448 558 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 ENOX2Q16206 610 aaKnown RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 SLC10A6Q3KNW5 377 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CCDC149Q6ZUS6 474 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 FILIP1Q7Z7B0 1213 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 WDR49Q8IV35 697 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 LNX1Q8TBB1 728 aaPredicted RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 ATOH1Q92858 354 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms