RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MYBPC2Q14324 1141 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 POSTNQ15063 836 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 SLC5A9Q2M3M2 681 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 ZBTB41Q5SVQ8 909 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 OVOS1Q6IE37 1185 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 ZNF852Q6ZMS4 543 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 DEPDC1BQ8WUY9 529 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 RPP25Q9BUL9 199 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 ST6GALNAC4Q9H4F1 302 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 SLITRK6Q9H5Y7 841 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 ASB7Q9H672 318 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 YIPF1Q9Y548 306 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 LACTBL1A8MY62 500 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 MAN2B1O00754 1011 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 LAMTOR5O43504 91 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 LMNAP02545 664 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 GAP43P17677 238 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 IGFBP6P24592 240 aaPredicted RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 DDIT3P35638 169 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 TNFSF9P41273 254 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 ENOX2Q16206 610 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 PRSS36Q5K4E3 855 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 ADALQ6DHV7 355 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 TPRG1Q6ZUI0 275 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 METTL23Q86XA0 190 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 IRF7Q92985 503 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 FOXQ1Q9C009 403 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 BRD9Q9H8M2 597 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 BLOC1S4Q9NUP1 217 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 HSFX1Q9UBD0 423 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 CPSF3Q9UKF6 684 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 C2CD2Q9Y426 696 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 ASB3Q9Y575 518 aa15.67■□□□□ 0.1
SMARCE1-209ENST00000478349 MEFVO15553 781 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 SEC24AO95486 1093 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ADRB2P07550 413 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 FOXK2Q01167 660 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 SPAG1Q07617 926 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 SMARCB1Q12824 385 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 GPR17Q13304 367 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 CUL4AQ13619 759 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ALCAMQ13740 583 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 VEPH1Q14D04 833 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ZNF528Q3MIS6 628 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 C1orf228Q6PIY5 440 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 RNF19BQ6ZMZ0 732 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 CCDC73Q6ZRK6 1079 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 NT5DC4Q86YG4 428 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 ST13P5Q8NFI4 369 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 SMARCD2Q92925 531 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 IER2Q9BTL4 223 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 LTB4R2Q9NPC1 389 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 SPATA6Q9NWH7 488 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 DLGAP2Q9P1A6 1054 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 FBXO4Q9UKT5 387 aa15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 AGO2Q9UKV8 859 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-209ENST00000478349 VWA8A3KMH1 1905 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 FAM170BA6NMN3 283 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 FAM189A1O60320 539 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 IL18RAPO95256 599 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 MYL4P12829 197 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 PSMC3P17980 439 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 EPHA5P54756 1037 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 ARHGAP15Q53QZ3 475 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 RRAGBQ5VZM2 374 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 JADE1Q6IE81 842 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 SV2BQ7L1I2 683 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 THEM5Q8N1Q8 247 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 MSANTD3Q96H12 275 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 ZNF560Q96MR9 790 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 ASB16Q96NS5 453 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 GCNAQ96QF7 691 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 HAPLN2Q9GZV7 340 aa15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 MRPL44Q9H9J2 332 aaKnown RBP15.65■□□□□ 0.1
SMARCE1-209ENST00000478349 DOCK8Q8NF50 2099 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 SPTLC1O15269 473 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 SP9P0CG40 484 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 GLULP15104 373 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 NMT1P30419 496 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 PNPLA4P41247 253 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 RPS9P46781 194 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 TUFMP49411 452 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 TAF6P49848 677 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 LILRA4P59901 499 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 FAM78AQ5JUQ0 283 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 TANGO2Q6ICL3 276 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
SMARCE1-209ENST00000478349 YAF2Q8IY57 180 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms