RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 GOLGA8IPA6NC78 632 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 GOLGA8JA6NMD2 632 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 ADAM12O43184 909 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 IL18RAPO95256 599 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 AVPR2P30518 371 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 OR1D2P34982 312 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 NDUFA8P51970 172 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 VCPP55072 806 aaKnown RBP15.31■□□□□ 0.04
PDE6D-204ENST00000477748 TDGQ13569 410 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 VARS2Q5ST30 1063 aaKnown RBP15.31■□□□□ 0.04
PDE6D-204ENST00000477748 LIN9Q5TKA1 542 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 EPM2AIP1Q7L775 607 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-204ENST00000477748 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 ZNF507Q8TCN5 953 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 NXPE3Q969Y0 559 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 KCNK12Q9HB15 430 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 PIDD1Q9HB75 910 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 DUSP12Q9UNI6 340 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 C2CD2Q9Y426 696 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 BACE2Q9Y5Z0 518 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 CDY1Q9Y6F8 540 aa15.31■□□□□ 0.04
PDE6D-204ENST00000477748 FAM237AA0A1B0GTK4 181 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 H7C4K7 107 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 KIAA0391O15091 583 aaKnown RBP15.3■□□□□ 0.04
PDE6D-204ENST00000477748 EXTL3O43909 919 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 ZMYND10O75800 440 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 UBE4BO95155 1302 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 PDGFBP01127 241 aaPredicted RBP15.3■□□□□ 0.04
PDE6D-204ENST00000477748 HNRNPA1P09651 372 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDE6D-204ENST00000477748 HOXA9P31269 272 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 GBP2P32456 591 aaPredicted RBP15.3■□□□□ 0.04
PDE6D-204ENST00000477748 EHHADHQ08426 723 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 RAB33AQ14088 237 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 NELFCDQ8IXH7 590 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 KMT2EQ8IZD2 1858 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 ZSWIM2Q8NEG5 633 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 APPL2Q8NEU8 664 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 PHOX2BQ99453 314 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 MFSD1Q9H3U5 465 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 SMOC2Q9H3U7 446 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 SLC39A2Q9NP94 309 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 RBAKQ9NYW8 714 aaPredicted RBP15.3■□□□□ 0.04
PDE6D-204ENST00000477748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.3■□□□□ 0.042e-7■■□□□ 14
PDE6D-204ENST00000477748 PCDHB8Q9UN66 801 aa15.3■□□□□ 0.04
PDE6D-204ENST00000477748 PPEF2O14830 753 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 KLRC4O43908 158 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
PDE6D-204ENST00000477748 POU2F2P09086 479 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 HOXD13P35453 343 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 TCF15Q12870 199 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 RSPO2Q6UXX9 243 aaPredicted RBP15.29■□□□□ 0.04
PDE6D-204ENST00000477748 RTL10Q7L3V2 364 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 NT5DC4Q86YG4 428 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 GPD1LQ8N335 351 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 SCFD1Q8WVM8 642 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 DPP3Q9NY33 737 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 ZFP37Q9Y6Q3 630 aaPredicted RBP15.29■□□□□ 0.04
PDE6D-204ENST00000477748 USP34Q70CQ2 3546 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 MYO15AQ9UKN7 3530 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 SCN1AP35498 2009 aa15.29■□□□□ 0.04
PDE6D-204ENST00000477748 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 M0QZQ0 153 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 PIRO00625 290 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 MYL1P05976 194 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 C8AP07357 584 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 ARPP19P56211 112 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 LILRA4P59901 499 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 TFAMQ00059 246 aaKnown RBP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 KMT5BQ4FZB7 885 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 ASTLQ6HA08 431 aaPredicted RBP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 ZNF280DQ6N043 979 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 USP37Q86T82 979 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 GOLPH3LQ9H4A5 285 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 HSPBP1Q9NZL4 362 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
PDE6D-204ENST00000477748 TIMM13Q9Y5L4 95 aaPredicted RBP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
PDE6D-204ENST00000477748 ANO9A1A5B4 782 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 ZNF233A6NK53 670 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 CLIC2O15247 247 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.04
PDE6D-204ENST00000477748 TBC1D4O60343 1298 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 XYLBO75191 536 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 ZNF202O95125 648 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 PAX3P23760 479 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 CLCN5P51795 746 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 WNT7BP56706 349 aa15.27■□□□□ 0.04
PDE6D-204ENST00000477748 SNRPFP62306 86 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms