RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
CMC1-209ENST00000477739 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
CMC1-209ENST00000477739 NR2E3Q9Y5X4 410 aa10.34□□□□□ -0.75
CMC1-209ENST00000477739 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
CMC1-209ENST00000477739 ARHGAP42A6NI28 874 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 WNT10BO00744 389 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 PRKCIP41743 596 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 NPTX2P47972 431 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 DHX34Q14147 1143 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 ANKRD20A3Q5VUR7 823 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 PCNX4Q63HM2 1172 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 LVRNQ6Q4G3 990 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 HACE1Q8IYU2 909 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 SNF8Q96H20 258 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 TRIM6Q9C030 488 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 INPP5FQ9Y2H2 1132 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 MYH4Q9Y623 1939 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 GJB1P08034 283 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 MAGEA4P43358 317 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 CXCL9Q07325 125 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 TNFAIP1Q13829 316 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 TXNRD3NBQ6F5E7 133 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 C11orf63Q6NUN7 778 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 RFX6Q8HWS3 928 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 CFAP61Q8NHU2 1237 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 PYROXD1Q8WU10 500 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 DDX50Q9BQ39 737 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.33□□□□□ -0.76
CMC1-209ENST00000477739 NOP53Q9NZM5 478 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 ATRNL1Q5VV63 1379 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 FAM187AA6NFU0 413 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 MIF4GDA9UHW6 222 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 H7C0C1 242 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 INO80B-WBP1J3KQ70 363 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 SNX3O60493 162 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 AGTP01019 485 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 RPA3P35244 121 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 ATP5OP48047 213 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 DNAJC24Q6P3W2 148 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 ARHGEF18Q6ZSZ5 1173 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 MTDHQ86UE4 582 aaKnown RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 MREGQ8N565 214 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 PPM1NQ8N819 430 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 RUNDC3BQ96NL0 473 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 CEP41Q9BYV8 373 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 INO80BQ9C086 356 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 MYLK2Q9H1R3 596 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
CMC1-209ENST00000477739 PICK1Q9NRD5 415 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 GPATCH2LQ9NWQ4 482 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 KCND2Q9NZV8 630 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 USH1CQ9Y6N9 552 aa10.33□□□□□ -0.76
CMC1-209ENST00000477739 ZMYM2Q9UBW7 1377 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 ATP2A1O14983 1001 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 PPFIA2O75334 1257 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 HLA-DRAP01903 254 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 JAM2P57087 298 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 ALCAMQ13740 583 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 BMPR2Q13873 1038 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 RUBCNQ92622 972 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 IWS1Q96ST2 819 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 TRIM56Q9BRZ2 755 aaKnown RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 POLR3FQ9H1D9 316 aaPredicted RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 MYOZ2Q9NPC6 264 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 FBXO6Q9NRD1 293 aaPredicted RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 TBC1D22BQ9NU19 505 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 ZDHHC18Q9NUE0 388 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 ZMYND8Q9ULU4 1186 aaPredicted RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 TAF1LQ8IZX4 1826 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 WDR64B1ANS9 1081 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 AVILO75366 819 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 ADRA1DP25100 572 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 RGS7P49802 495 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 CDH8P55286 799 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 COPS2P61201 443 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 SAMD7Q7Z3H4 446 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 USP37Q86T82 979 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 SYTL5Q8TDW5 730 aaPredicted RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 STMN2Q93045 179 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 ATG4CQ96DT6 458 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 NGRNQ9NPE2 291 aaKnown RBP10.32□□□□□ -0.76
CMC1-209ENST00000477739 RNF146Q9NTX7 359 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 SEPT10Q9P0V9 454 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 TMEM59LQ9UK28 342 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
CMC1-209ENST00000477739 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms