RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 AMACRQ9UHK6 382 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 CD4P01730 458 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 ETFBP38117 255 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 SERPINB10P48595 397 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 ANGPT1Q15389 498 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 IFNEQ86WN2 208 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 LPAR1Q92633 364 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 ISCA1Q9BUE6 129 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 OSBPL10Q9BXB5 764 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 CCL15-CCL14A0A0B4J2E2 113 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 C2CD2LO14523 706 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 CCL15Q16663 113 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 SGO1Q5FBB7 561 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 RSPH10B2B2RC85 870 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 PDXKO00764 312 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 TFRCP02786 760 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 RSPH10BP0C881 870 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 HSPA9P38646 679 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 ATP2C1P98194 919 aaPredicted RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 CCDC142Q17RM4 750 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 DHX40Q8IX18 779 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 SLC7A14Q8TBB6 771 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 SLC38A7Q9NVC3 462 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 FOXN1O15353 648 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 ALDH1A3P47895 512 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 OLFM3Q96PB7 478 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 TCP11X1B4DZS4 312 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 GRIN3BO60391 1043 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 ATP1A1P05023 1023 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 P3H1Q32P28 736 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 SV2CQ496J9 727 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.46■□□□□ 0.71
VARS2-209ENST00000477288 MED14O60244 1454 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 AP3B1O00203 1094 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 RALBP11234 206 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 SLC9A1P19634 815 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 SGSM1Q2NKQ1 1148 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 DTX3LQ8TDB6 740 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 RNPC3Q96LT9 517 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 SENP7Q9BQF6 1050 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 C17orf80Q9BSJ5 609 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 TASP1Q9H6P5 420 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 MARCOQ9UEW3 520 aaPredicted RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 UBXN8O00124 270 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 CNGA3Q16281 694 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 CCDC157Q569K6 752 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 PLA2G4FQ68DD2 849 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 LRRC8BQ6P9F7 803 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 SMAD5Q99717 465 aaKnown RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 APOL5Q9BWW9 433 aa19.46■□□□□ 0.71
VARS2-209ENST00000477288 CAB39Q9Y376 341 aaPredicted RBP19.46■□□□□ 0.71
VARS2-209ENST00000477288 FLT1P17948 1338 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 TBC1D4O60343 1298 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 NDUFB10O96000 172 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 PTRHD1Q6GMV3 140 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 MTMR4Q9NYA4 1195 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 SLC16A3O15427 465 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 MAGEB2O15479 319 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 CYP2C9P11712 490 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 GUCY1A2P33402 732 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 HUNKP57058 714 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 TRADDQ15628 312 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 CLEC10AQ8IUN9 316 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 TSPAN17Q96FV3 270 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 DTNAQ9Y4J8 743 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 CELF2O95319 508 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 LRRC71Q8N4P6 559 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 RBBP8NLQ8NC74 664 aaPredicted RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 NPHS2Q9NP85 383 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 XPO7Q9UIA9 1087 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 FOXO4P98177 505 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 PRKCQQ04759 706 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 SHCBP1Q8NEM2 672 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 NSUN4Q96CB9 384 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 NFKBIL1Q9UBC1 381 aaPredicted RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 NR3C2P08235 984 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 DHX34Q14147 1143 aaKnown RBP19.45■□□□□ 0.7
VARS2-209ENST00000477288 EFCAB12Q6NXP0 572 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 FAM129AQ9BZQ8 928 aa19.45■□□□□ 0.7
VARS2-209ENST00000477288 MYO1CO00159 1063 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 PRKCEQ02156 737 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 ARHGAP15Q53QZ3 475 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 ATF7IP2Q5U623 682 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 ATL2Q8NHH9 583 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 RAD18Q9NS91 495 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 HARS2P49590 506 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 ZNF543Q08ER8 600 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 SPATA16Q9BXB7 569 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 PCMTD2Q9NV79 361 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 COPG1Q9Y678 874 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 DDHD2O94830 711 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 GPRC5AQ8NFJ5 357 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 MRPL1Q9BYD6 325 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 TMEM117Q9H0C3 514 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 RAB6BQ9NRW1 208 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 SRP72O76094 671 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms