RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 DYDC2Q96IM9 177 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 SHDQ96IW2 340 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 MAN1C1Q9NR34 630 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 PRMT7Q9NVM4 692 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-214ENST00000477152 FNIP2Q9P278 1114 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 WNT16Q9UBV4 365 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 DNAJB4Q9UDY4 337 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 IPPQ9Y573 584 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 PHLPP2Q6ZVD8 1323 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 CCDC195A0A1B0GUA6 201 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 TMEM150BA6NC51 233 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 H0Y858 1186 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 C2CD2LO14523 706 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 N4BP3O15049 544 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 EDIL3O43854 480 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 DDHD2O94830 711 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 NBL1P41271 181 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 DSG1Q02413 1049 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 CTTNQ14247 550 aaKnown RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 PPP2R5AQ15172 486 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 LIN9Q5TKA1 542 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 ZC3H14Q6PJT7 736 aaKnown RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 RTL10Q7L3V2 364 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 ZNF280BQ86YH2 543 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 COLGALT2Q8IYK4 626 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 SMG7Q92540 1137 aaKnown RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 BHMTQ93088 406 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 RXFP1Q9HBX9 757 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 WDR6Q9NNW5 1121 aaKnown RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 MARK1Q9P0L2 795 aa8.02□□□□□ -1.13
BRCA1-214ENST00000477152 PRG3Q9Y2Y8 225 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-214ENST00000477152 CLUHO75153 1309 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 SF3B1O75533 1304 aaKnown RBP eCLIP8.01□□□□□ -1.131e-9■■■■■ 99.9
BRCA1-214ENST00000477152 ARL5CA6NH57 179 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 NEMFO60524 1076 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 TSPAN1O60635 241 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 ASGR2P07307 311 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 WEE2P0C1S8 567 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 RARAP10276 462 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 ACPPP15309 386 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 AOC1P19801 751 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 HOXA11P31270 313 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 MLH1P40692 756 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 CTBSQ01459 385 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 CYP4A11Q02928 519 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 SCRN1Q12765 414 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 ORC2Q13416 577 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 TTC39BQ5VTQ0 682 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 VWA5B2Q8N398 1253 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 NACC1Q96RE7 527 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 GAD1Q99259 594 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 TTC12Q9H892 705 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 KCNK12Q9HB15 430 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 TUFT1Q9NNX1 390 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 ADAM28Q9UKQ2 775 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 SLITRK3O94933 977 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 MUTP22033 750 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 LBRQ14739 615 aaKnown RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 NPY5RQ15761 445 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 UBXN11Q5T124 520 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 FUT10Q6P4F1 479 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 NXPE4Q6UWF7 544 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 MTSS1LQ765P7 747 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 TMEM173Q86WV6 379 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-214ENST00000477152 HAS1Q92839 578 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 IFT74Q96LB3 600 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 APOL6Q9BWW8 343 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 RAB34Q9BZG1 259 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 FAM86C1Q9NVL1 165 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 RGL1Q9NZL6 768 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 EPS15L1Q9UBC2 864 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 KCNG1Q9UIX4 513 aa8.01□□□□□ -1.13
BRCA1-214ENST00000477152 C2orf16Q68DN1 1984 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 LRRIQ4A6NIV6 560 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 MEIS3P2A8K0S8 358 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 TEX28O15482 410 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 TRAPPC3O43617 180 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 THP07101 528 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 HNRNPA1P09651 372 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-214ENST00000477152 SRFP11831 508 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 ATP2B1P20020 1258 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 ARL2P36404 184 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 TXKP42681 527 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 SCNN1GP51170 649 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 DSC1Q08554 894 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 TUSC3Q13454 348 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 MAPK6Q16659 721 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 KIAA0319Q5VV43 1072 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
BRCA1-214ENST00000477152 HAUS3Q68CZ6 603 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 CCDC105Q8IYK2 499 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 TMEM105Q8N8V8 129 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
BRCA1-214ENST00000477152 FBF1Q8TES7 1133 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 RIN2Q8WYP3 895 aaPredicted RBP8□□□□□ -1.13
BRCA1-214ENST00000477152 CPB2Q96IY4 423 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 AIFM3Q96NN9 605 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms