RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 MTRRQ9UBK8 725 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 DERAQ9Y315 318 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 CDY1Q9Y6F8 540 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 M0QZQ0 153 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 LDHAP00338 332 aaKnown RBP13.45□□□□□ -0.26
APTX-220ENST00000476858 NR3C1P04150 777 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
APTX-220ENST00000476858 UBE2HP62256 183 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 CD302Q8IX05 232 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 SUSD6Q92537 303 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 MFSD14AQ96MC6 490 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 FNIP2Q9P278 1114 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
APTX-220ENST00000476858 CARNS1A5YM72 827 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 PDXKO00764 312 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 NRG2O14511 850 aaPredicted RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 NCK2O43639 380 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 EXOC3O60645 756 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 LRRN2O75325 713 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 AKAP3O75969 853 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 CST3P01034 146 aaPredicted RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 ARPP19P56211 112 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 SMAD4Q13485 552 aaKnown RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 PSMD6Q15008 389 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 SMAD2Q15796 467 aaKnown RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 HS2ST1Q7LGA3 356 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 GUF1Q8N442 669 aaKnown RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 CASP10Q92851 521 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
APTX-220ENST00000476858 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 MUC3AQ02505 3323 aa13.44□□□□□ -0.26
APTX-220ENST00000476858 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 SEC24AO95486 1093 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 GLUD1P00367 558 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 ADH1AP07327 375 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 POU5F1Q01860 360 aaKnown RBP13.43□□□□□ -0.26
APTX-220ENST00000476858 ROR1Q01973 937 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 ELAVL2Q12926 359 aaKnown RBP13.43□□□□□ -0.26
APTX-220ENST00000476858 BFSP1Q12934 665 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 MORC3Q14149 939 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
APTX-220ENST00000476858 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 ANKRD40Q6AI12 368 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 DSTYKQ6XUX3 929 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 SLC9A9Q8IVB4 645 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 KREMEN2Q8NCW0 462 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 OR10T2Q8NGX3 314 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 MED15Q96RN5 788 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 CGRRF1Q99675 332 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 POMKQ9H5K3 350 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
APTX-220ENST00000476858 CYB561D2O14569 222 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 SYN3O14994 580 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 VNN1O95497 513 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 KRT19P08727 400 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 NTHL1P78549 312 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 ZP2Q05996 745 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 RAB33AQ14088 237 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 CTXN3Q4LDR2 81 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
APTX-220ENST00000476858 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 TTC9BQ8N6N2 239 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 ST13P5Q8NFI4 369 aaPredicted RBP13.42□□□□□ -0.26
APTX-220ENST00000476858 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 UHRF1Q96T88 793 aaPredicted RBP13.42□□□□□ -0.26
APTX-220ENST00000476858 LPIN3Q9BQK8 851 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 ADAM7Q9H2U9 754 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.262e-7■■■■■ 86.5
APTX-220ENST00000476858 L1RE1Q9UN81 338 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 BACE2Q9Y5Z0 518 aa13.42□□□□□ -0.26
APTX-220ENST00000476858 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
APTX-220ENST00000476858 DLL1O00548 723 aa13.41□□□□□ -0.26
APTX-220ENST00000476858 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms