RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TNFAIP1Q13829 316 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 RASIP1Q5U651 963 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 FYB2Q5VWT5 728 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 TRPM8Q7Z2W7 1104 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 FAM71DQ8N9W8 422 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 AGBL3Q8NEM8 1001 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 HEXIM2Q96MH2 286 aaKnown RBP5.28□□□□□ -1.56
CCDC39-204ENST00000476379 CEP63Q96MT8 703 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 NUDCD1Q96RS6 583 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 POLR3FQ9H1D9 316 aaPredicted RBP5.28□□□□□ -1.56
CCDC39-204ENST00000476379 SUDS3Q9H7L9 328 aaPredicted RBP5.28□□□□□ -1.56
CCDC39-204ENST00000476379 MAGEF1Q9HAY2 307 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 RNF146Q9NTX7 359 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 AKT3Q9Y243 479 aa5.28□□□□□ -1.56
CCDC39-204ENST00000476379 ASTN1O14525 1302 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MEI4A8MW99 385 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 EYA4O95677 639 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MYL1P05976 194 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PDGFRBP09619 1106 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ELNP15502 786 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CA8P35219 290 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 QARSP47897 775 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FXR2P51116 673 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TMPRSS15P98073 1019 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MAPK7Q13164 816 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 UGCGQ16739 394 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ZBTB41Q5SVQ8 909 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CCDC62Q6P9F0 684 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FBXL16Q8N461 479 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 POU5F2Q8N7G0 328 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 C2orf69Q8N8R5 385 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SLC7A3Q8WY07 619 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 INPP4AQ96PE3 977 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TRIM56Q9BRZ2 755 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 STMN4Q9H169 189 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ANLNQ9NQW6 1124 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 BZW2Q9Y6E2 419 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 DDX60Q8IY21 1712 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PDXKO00764 312 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ENTPD5O75356 428 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 AVILO75366 819 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ZMPSTE24O75844 475 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ANP32DO95626 131 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ADRB2P07550 413 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SPATA31C1P0DKV0 1188 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PTPRAP18433 802 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 KRT4P19013 534 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GTF2H1P32780 548 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RPL7AP62424 266 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 IL9RQ01113 521 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SLC12A1Q13621 1099 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PDIA5Q14554 519 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CLUL1Q15846 466 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MROH9Q5TGP6 573 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 KCNV1Q6PIU1 500 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 IRF2BP2Q7Z5L9 587 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RNF135Q8IUD6 432 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RNF149Q8NC42 400 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ERLEC1Q96DZ1 483 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 LRRC37BQ96QE4 947 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 OSBPL7Q9BZF2 842 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TTYH3Q9C0H2 523 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 VIPAS39Q9H9C1 493 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RBAKQ9NYW8 714 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GAKO14976 1311 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 F8VP50 259 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CCDC188H7C350 402 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TGFB1I1O43294 461 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CREB3O43889 395 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TCF4P15884 667 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 EPHB2P29323 1055 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ELF1P32519 619 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GTF2A2P52657 109 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RABGGTBP53611 331 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PDE1BQ01064 536 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ITGB3BPQ13352 177 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SPATA21Q7Z572 469 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 USP37Q86T82 979 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ERICH1Q86X53 443 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CEP120Q8N960 986 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SYT2Q8N9I0 419 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 USP6NLQ92738 828 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SEMA4DQ92854 862 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 COPS5Q92905 334 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SGF29Q96ES7 293 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CCDC17Q96LX7 622 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PCDHB18PQ96TA0 734 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 NCAPGQ9BPX3 1015 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 STK33Q9BYT3 514 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TRABDQ9H4I3 376 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RIOX1Q9H6W3 641 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 DUOX1Q9NRD9 1551 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ADAMTS7Q9UKP4 1686 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 LAMB4A4D0S4 1761 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 WNK3Q9BYP7 1800 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CCT8L1PA6NM43 557 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms