RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CDCA3Q99618 268 aaPredicted RBP31.86■■■□□ 2.69
HOXB3-208ENST00000476342 ARMCX3Q9UH62 379 aaPredicted RBP31.86■■■□□ 2.69
HOXB3-208ENST00000476342 M0QZQ0 153 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 LETM1O95202 739 aaPredicted RBP31.85■■■□□ 2.69
HOXB3-208ENST00000476342 GNA14O95837 355 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 TKTP29401 623 aaKnown RBP31.85■■■□□ 2.69
HOXB3-208ENST00000476342 MYO1EQ12965 1108 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 CCDC40Q4G0X9 1142 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 APPL2Q8NEU8 664 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 PPM1EQ8WY54 764 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 SRRTQ9BXP5 876 aaKnown RBP31.85■■■□□ 2.69
HOXB3-208ENST00000476342 PCDHB8Q9UN66 801 aa31.85■■■□□ 2.69
HOXB3-208ENST00000476342 LILRB3O75022 631 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 PHACTR2O75167 634 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 NRIP1P48552 1158 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 TRPC3Q13507 836 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 TPD52L1Q16890 204 aaPredicted RBP31.84■■■□□ 2.69
HOXB3-208ENST00000476342 ANKS3Q6ZW76 656 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 FRMD5Q7Z6J6 570 aa31.84■■■□□ 2.69
HOXB3-208ENST00000476342 RBM23Q86U06 439 aaKnown RBP31.84■■■□□ 2.69
HOXB3-208ENST00000476342 KPNA7A9QM74 516 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 NCK2O43639 380 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 STX10O60499 249 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 TRIM49P0CI25 452 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 TRIM49CP0CI26 452 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 ODC1P11926 461 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 MCCD1P59942 119 aaPredicted RBP31.83■■■□□ 2.69
HOXB3-208ENST00000476342 PSMD5Q16401 504 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 SENP8Q96LD8 212 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 EYSQ5T1H1 3165 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 SPTLC1O15269 473 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 C4BPAP04003 597 aaKnown RBP31.83■■■□□ 2.69
HOXB3-208ENST00000476342 HYAL1Q12794 435 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 DUSP6Q16828 381 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 ZACNQ401N2 412 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 DCAF17Q5H9S7 520 aaPredicted RBP31.83■■■□□ 2.69
HOXB3-208ENST00000476342 C1orf220Q5T0J3 134 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 TCERG1LQ5VWI1 586 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 TDRD10Q5VZ19 366 aaKnown RBP31.83■■■□□ 2.69
HOXB3-208ENST00000476342 RXFP1Q9HBX9 757 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 FNIP2Q9P278 1114 aa31.83■■■□□ 2.69
HOXB3-208ENST00000476342 ADH1AP07327 375 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 GTF2H1P32780 548 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 SKIV2LQ15477 1246 aaKnown RBP31.82■■■□□ 2.68
HOXB3-208ENST00000476342 NFKBIBQ15653 356 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 PRSS55Q6UWB4 352 aaPredicted RBP31.82■■■□□ 2.68
HOXB3-208ENST00000476342 SV2AQ7L0J3 742 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 LNX1Q8TBB1 728 aaPredicted RBP31.82■■■□□ 2.68
HOXB3-208ENST00000476342 HPDLQ96IR7 371 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 MED15Q96RN5 788 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 IGFLR1Q9H665 355 aa31.82■■■□□ 2.68
HOXB3-208ENST00000476342 PER2O15055 1255 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 CNPP09543 421 aaKnown RBP31.81■■■□□ 2.68
HOXB3-208ENST00000476342 CCDC192P0DO97 292 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 TYMPP19971 482 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 TYRO3Q06418 890 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 VARS2Q5ST30 1063 aaKnown RBP31.81■■■□□ 2.68
HOXB3-208ENST00000476342 PPFIBP1Q86W92 1011 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 KLHL5Q96PQ7 755 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 TMEM8AQ9HCN3 771 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 DSEQ9UL01 958 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 REV3LO60673 3130 aa31.81■■■□□ 2.68
HOXB3-208ENST00000476342 H7C4K7 107 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 CYB561D2O14569 222 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 CST3P01034 146 aaPredicted RBP31.8■■■□□ 2.68
HOXB3-208ENST00000476342 KLRC2P26717 231 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 GCLMP48507 274 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 YWHAHQ04917 246 aaPredicted RBP31.8■■■□□ 2.68
HOXB3-208ENST00000476342 PPP3CAQ08209 521 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 MMRN2Q9H8L6 949 aa31.8■■■□□ 2.68
HOXB3-208ENST00000476342 TEX28O15482 410 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 ATICP31939 592 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 NDUFV1P49821 464 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 MARSP56192 900 aaKnown RBP31.79■■■□□ 2.68
HOXB3-208ENST00000476342 NCOA4Q13772 614 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 KRT39Q6A163 491 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 SCARA3Q6AZY7 606 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 ZNF280DQ6N043 979 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 EFHBQ8N7U6 833 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 GDAP2Q9NXN4 497 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 MTRRQ9UBK8 725 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 BACE2Q9Y5Z0 518 aa31.79■■■□□ 2.68
HOXB3-208ENST00000476342 CLASP2O75122 1294 aaKnown RBP31.78■■■□□ 2.68
HOXB3-208ENST00000476342 STAU1O95793 577 aaKnown RBP31.78■■■□□ 2.68
HOXB3-208ENST00000476342 GTF2F1P35269 517 aaKnown RBP eCLIP31.78■■■□□ 2.684e-7■■■□□ 16.8
HOXB3-208ENST00000476342 MXI1P50539 228 aa31.78■■■□□ 2.68
HOXB3-208ENST00000476342 C15orf39Q6ZRI6 1047 aa31.78■■■□□ 2.68
HOXB3-208ENST00000476342 TIMM13Q9Y5L4 95 aaPredicted RBP31.78■■■□□ 2.68
HOXB3-208ENST00000476342 SNX9Q9Y5X1 595 aa31.78■■■□□ 2.68
HOXB3-208ENST00000476342 TSC2P49815 1807 aa31.78■■■□□ 2.68
HOXB3-208ENST00000476342 COL6A3P12111 3177 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 HUS1O60921 280 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 CLSTN1O94985 981 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 CYP11A1P05108 521 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 SRGAP2BP0DMP2 458 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 PIK3CAP42336 1068 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 MRPL58Q14197 206 aaKnown RBP31.77■■■□□ 2.68
HOXB3-208ENST00000476342 METTL23Q86XA0 190 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 FAM114A1Q8IWE2 563 aa31.77■■■□□ 2.68
HOXB3-208ENST00000476342 SLC35C1Q96A29 364 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms