RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CFAP69A5D8W1 941 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 RECQL4O94761 1208 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 AGFG2O95081 481 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 PRSS23O95084 383 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 SCAF4O95104 1147 aaKnown RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 ZBED1O96006 694 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 GJB1P08034 283 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 RHCEP18577 417 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 MAKP20794 623 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 PSMC1P62191 440 aaKnown RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 NOMO3P69849 1222 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 RHDQ02161 417 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 DPTQ07507 201 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 CNN3Q15417 329 aaKnown RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 RABL3Q5HYI8 236 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 TSHZ3Q63HK5 1081 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 SWSAP1Q6NVH7 229 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 KSR2Q6VAB6 950 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 MAEAQ7L5Y9 396 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 CELF5Q8N6W0 485 aaKnown RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 LENG9Q96B70 501 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 ZMAT3Q9HA38 289 aaKnown RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 CFAP97Q9P2B7 532 aa6.22□□□□□ -1.41
PTCD3-211ENST00000476215 USP15Q9Y4E8 981 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-211ENST00000476215 A0A1W2PPL8 197 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 TRIM24O15164 1050 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 MATN4O95460 622 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 HRGP04196 525 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 CKBP12277 381 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 CACNB3P54284 484 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 FAM193AP78312 1265 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 EXOSC9Q06265 439 aaKnown RBP6.21□□□□□ -1.42
PTCD3-211ENST00000476215 FHL2Q14192 279 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 NOMO2Q5JPE7 1267 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 FAM102AQ5T9C2 384 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-211ENST00000476215 RNF220Q5VTB9 566 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 DARS2Q6PI48 645 aaKnown RBP6.21□□□□□ -1.42
PTCD3-211ENST00000476215 PCSK4Q6UW60 755 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 Q6ZPA2 131 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 ULK2Q8IYT8 1036 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 CPT1CQ8TCG5 803 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 DCLRE1CQ96SD1 692 aaKnown RBP6.21□□□□□ -1.42
PTCD3-211ENST00000476215 NEU1Q99519 415 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 PCGF6Q9BYE7 350 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 MMRN2Q9H8L6 949 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 RSAD1Q9HA92 442 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 TRPM5Q9NZQ8 1165 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 ZDHHC8Q9ULC8 765 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 FAM50BQ9Y247 325 aa6.21□□□□□ -1.42
PTCD3-211ENST00000476215 PRSS29PA6NIE9 313 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 DIRC3C9JPN6 131 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF185O15231 689 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 PHGDHO43175 533 aaKnown RBP6.2□□□□□ -1.42
PTCD3-211ENST00000476215 FAM20BO75063 409 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 KITP10721 976 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 HDCP19113 662 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 GCSHP23434 173 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 KCNJ5P48544 419 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 SOX8P57073 446 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 COBLL1Q53SF7 1204 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 AGAP9Q5VTM2 703 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 METRNLQ641Q3 311 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 CYB5RLQ6IPT4 315 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 GDF7Q7Z4P5 450 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 LDLRAD3Q86YD5 345 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 PDSS2Q86YH6 399 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 RHOT2Q8IXI1 618 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 SLC17A8Q8NDX2 589 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 TMIEQ8NEW7 156 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 OR56A1Q8NGH5 318 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 NUP133Q8WUM0 1156 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 LARP4BQ92615 738 aaKnown RBP6.2□□□□□ -1.42
PTCD3-211ENST00000476215 SARGQ9BW04 601 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 IMPG2Q9BZV3 1241 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 BHMT2Q9H2M3 363 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 SLITRK6Q9H5Y7 841 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 ATP6V0A4Q9HBG4 840 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-211ENST00000476215 RLIMQ9NVW2 624 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 ATP11BQ9Y2G3 1177 aa6.2□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF785A8K8V0 405 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 GOLIM4O00461 696 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 ANXA1P04083 346 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 GNAI2P04899 355 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 MYL1P05976 194 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 ADH4P08319 380 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 RARBP10826 455 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 TGFB2P61812 414 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 KIF22Q14807 665 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 PDCD4Q53EL6 469 aaKnown RBP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 CCSAPQ6IQ19 270 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 CCDC146Q8IYE0 955 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 PCSK9Q8NBP7 692 aaKnown RBP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 MARS2Q96GW9 593 aaKnown RBP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 KLHL32Q96NJ5 620 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms