RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PLEKHO2Q8TD55 490 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CTNNBL1Q8WYA6 563 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 PAWRQ96IZ0 340 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 TRIM51Q9BSJ1 452 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 TIPINQ9BVW5 301 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 MOV10L1Q9BXT6 1211 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 WDR11Q9BZH6 1224 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 THAP2Q9H0W7 228 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 RANBP17Q9H2T7 1088 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 C11orf49Q9H6J7 331 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 PPANQ9NQ55 473 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 AVENQ9NQS1 362 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 UVRAGQ9P2Y5 699 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 GTF3C4Q9UKN8 822 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 TMX2Q9Y320 296 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 LOXHD1Q8IVV2 1947 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CENPFP49454 3210 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 MKI67P46013 3256 aaKnown RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 A0A1W2PRG0 241 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 CLIC2O15247 247 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 STRNO43815 780 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PEX10O60683 326 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 GCNT3O95395 438 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SLC25A27O95847 323 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 HOXC6P09630 235 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PYGMP11217 842 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 BMP3P12645 472 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 CHN1P15882 459 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 ADSSP30520 456 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 GTF2H1P32780 548 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 GPC3P51654 580 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 HSD17B4P51659 736 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 NCKAP1LP55160 1127 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 RNASE9P60153 205 aaKnown RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 COPS2P61201 443 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 CLDN10P78369 228 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 FMO1Q01740 532 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PPP3CAQ08209 521 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 CCDC15Q0P6D6 951 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 BNIP1Q12981 228 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 TRIM32Q13049 653 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 ACVR2BQ13705 512 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SLC29A2Q14542 456 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 KRT71Q3SY84 523 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 ZC2HC1CQ53FD0 456 aaPredicted RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 VSTM1Q6UX27 236 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 C15orf39Q6ZRI6 1047 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 STXBP4Q6ZWJ1 553 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 HS2ST1Q7LGA3 356 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 NCAPG2Q86XI2 1143 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 LRRC34Q8IZ02 419 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SPICE1Q8N0Z3 855 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SAMD3Q8N6K7 520 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 CCDC197Q8NCU1 140 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 USP6NLQ92738 828 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 KRT35Q92764 455 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 GLG1Q92896 1179 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 HVCN1Q96D96 273 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 DYDC2Q96IM9 177 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SERPINB12Q96P63 405 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 NTPCRQ9BSD7 190 aaKnown RBP7.33□□□□□ -1.24
UBR4-212ENST00000475973 SPATC1LQ9H0A9 340 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 IKZF4Q9H2S9 585 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 SEMA4AQ9H3S1 761 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 MROH8Q9H579 483 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 RABEP2Q9H5N1 569 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 TMEM206Q9H813 350 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 ATP6V0A4Q9HBG4 840 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 BTBD7Q9P203 1132 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PNMA2Q9UL42 364 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 OGDHLQ9ULD0 1010 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PRR12Q9ULL5 1215 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 PHIPQ8WWQ0 1821 aa7.33□□□□□ -1.24
UBR4-212ENST00000475973 BRCA2P51587 3418 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 GOLGA6L10A0A0M3HER8 536 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 GOLGA6L7A0A1B0GV03 622 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 A0A1W2PPC1 479 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 SPDYE3A6NKU9 549 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 O00370 1275 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 MARCH6O60337 910 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 SORBS3O60504 671 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 TBCAO75347 108 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 FAM13AO94988 1023 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ATG7O95352 703 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 FTLP02792 175 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 KRT18P05783 430 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 ABHD2P08910 425 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 RARAP10276 462 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CCNB1P14635 433 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ITIH2P19823 946 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 TNFAIP3P21580 790 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms