RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 STAU1O95793 577 aaKnown RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 TIMP1P01033 207 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 KCNE1P15382 129 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 CYP3A5P20815 502 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 AKAP5P24588 427 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 CLCN1P35523 988 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 PNPLA4P41247 253 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 MAGEA1P43355 309 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 TNNC1P63316 161 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 PTK2Q05397 1052 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF560Q96MR9 790 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 PDCL3Q9H2J4 239 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-227ENST00000475832 HES2Q9Y543 173 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF623O75123 536 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 LCA5LO95447 670 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-227ENST00000475832 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
MRPL55-227ENST00000475832 VAV2P52735 878 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 XKR4Q5GH76 650 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 SPOPLQ6IQ16 392 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
MRPL55-227ENST00000475832 SEPT8Q92599 483 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 APBB2Q92870 758 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 BADQ92934 168 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 KREMEN1Q96MU8 473 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 AGPAT1Q99943 283 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 ADAM2Q99965 735 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 CYP3A43Q9HB55 503 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
MRPL55-227ENST00000475832 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
MRPL55-227ENST00000475832 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 CYP26A1O43174 497 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 TNNT1P13805 278 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 RAG1P15918 1043 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-227ENST00000475832 DSC3Q14574 896 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 WDR72Q3MJ13 1102 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 MFSD5Q6N075 450 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF571Q7Z3V5 609 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-227ENST00000475832 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 KAT5Q92993 513 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-227ENST00000475832 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
MRPL55-227ENST00000475832 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
MRPL55-227ENST00000475832 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 EOMESO95936 686 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 THP07101 528 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 PNMA6AP0CW24 399 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 PAX3P23760 479 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 CYP27A1Q02318 531 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 NAB2Q15742 525 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 ASTE1Q2TB18 679 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 SV2CQ496J9 727 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 RPUSD2Q8IZ73 545 aaKnown RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 MMS19Q96T76 1030 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 HIPK3Q9H422 1215 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 RSAD1Q9HA92 442 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-227ENST00000475832 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
MRPL55-227ENST00000475832 A0A087X0T9 212 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 MEFVO15553 781 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms