RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GABPB1Q06547 395 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 SLC24A5Q71RS6 500 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 CD302Q8IX05 232 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 IQCDQ96DY2 449 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 F8W810 466 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 B4GALT3O60512 393 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 ACRP10323 421 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 CSF2RAP15509 400 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 ACO1P21399 889 aaKnown RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 ASPAP45381 313 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 NAB2Q15742 525 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 CLLU1OSQ5K130 101 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 TAF3Q5VWG9 929 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 C9orf57Q5W0N0 161 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 SHC3Q92529 594 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 IMPG2Q9BZV3 1241 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 HCSTQ9UBK5 93 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 ADAMTS1Q9UHI8 967 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 EPN1Q9Y6I3 576 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 RBP5P82980 135 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 PAN2Q504Q3 1202 aaKnown RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 TMEM270Q6UE05 265 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 CCAR2Q8N163 923 aaKnown RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 BEST2Q8NFU1 509 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 CCDC42Q96M95 316 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 TRAIPQ9BWF2 469 aa19.39■□□□□ 0.69
ATG4B-217ENST00000475693 UBQLN1Q9UMX0 589 aaKnown RBP19.39■□□□□ 0.69
ATG4B-217ENST00000475693 HCRTO43612 131 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 NDUFA10O95299 355 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 SERPING1P05155 500 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 GCNT1Q02742 428 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 UBE2Q1Q7Z7E8 422 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 FAM71AQ8IYT1 594 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 KIF18AQ8NI77 898 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 OLIG1Q8TAK6 271 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 SEPT8Q92599 483 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 RPS6KC1Q96S38 1066 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 ITGA11Q9UKX5 1188 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 GIT1Q9Y2X7 761 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 PCDHB4Q9Y5E5 795 aa19.38■□□□□ 0.69
ATG4B-217ENST00000475693 A0A087X0T9 212 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.692e-8■□□□□ 9.8
ATG4B-217ENST00000475693 UPP2O95045 317 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 THP07101 528 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 FAM228BP0C875 321 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 CLCNKBP51801 687 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 SYN2Q92777 582 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-217ENST00000475693 MMS19Q96T76 1030 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 NIF3L1Q9GZT8 377 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 DEF6Q9H4E7 631 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 HMGXB4Q9UGU5 601 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 ADGRG1Q9Y653 693 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 SPDYE4A6NLX3 237 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 CFHP08603 1231 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 RAB27AP51159 221 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 KIF11P52732 1056 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 FAM189BP81408 668 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 ASTE1Q2TB18 679 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-217ENST00000475693 ZNF667Q5HYK9 610 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 NOP9Q86U38 636 aaKnown RBP19.37■□□□□ 0.69
ATG4B-217ENST00000475693 ZNF280BQ86YH2 543 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 C3orf58Q8NDZ4 430 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 HASPINQ8TF76 798 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 CISHQ9NSE2 258 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 PPP2R2CQ9Y2T4 447 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 DERAQ9Y315 318 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 SNX9Q9Y5X1 595 aa19.37■□□□□ 0.69
ATG4B-217ENST00000475693 RCCD1A6NED2 376 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 PIRO00625 290 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 AKR1B10O60218 316 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 GLYCTKQ8IVS8 523 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 TRIM10Q9UDY6 481 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 RALGAPA2Q2PPJ7 1873 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 ANO9A1A5B4 782 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 TMCO5BA8MYB1 307 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 NRDCO43847 1150 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 CXCL10P02778 98 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 RAG1P15918 1043 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 NT5DC4Q86YG4 428 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 HACE1Q8IYU2 909 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-217ENST00000475693 TWNKQ96RR1 684 aa19.36■□□□□ 0.69
ATG4B-217ENST00000475693 NUCKS1Q9H1E3 243 aaKnown RBP19.36■□□□□ 0.69
ATG4B-217ENST00000475693 SEPT11Q9NVA2 429 aaKnown RBP19.36■□□□□ 0.69
ATG4B-217ENST00000475693 I3L4J1 428 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 TIMP1P01033 207 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 FERP16591 822 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 CDK17Q00537 523 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 PGBD4Q96DM1 585 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 LPIN3Q9BQK8 851 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 FTHL17Q9BXU8 183 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 TAS2R14Q9NYV8 317 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 MYO6Q9UM54 1294 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 NME7Q9Y5B8 376 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 PDCD11Q14690 1871 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms