RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 FUBP1Q96AE4 644 aaKnown RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 BBC3Q96PG8 261 aaPredicted RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 R3HDMLQ9H3Y0 253 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 PRDM13Q9H4Q3 707 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 SLAMF7Q9NQ25 335 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 KCTD5Q9NXV2 234 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 JKAMPQ9P055 326 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 MASP2O00187 686 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 SLC43A1O75387 559 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 SIM1P81133 766 aaPredicted RBP6.05□□□□□ -1.44
LTN1-204ENST00000475344 PRIMA1Q86XR5 153 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 BOLLQ8N9W6 283 aaKnown RBP6.05□□□□□ -1.44
LTN1-204ENST00000475344 Q8NA96 180 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 PDPRQ8NCN5 879 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 MAN1C1Q9NR34 630 aa6.05□□□□□ -1.44
LTN1-204ENST00000475344 VSX1Q9NZR4 365 aaPredicted RBP6.05□□□□□ -1.44
LTN1-204ENST00000475344 ARHGEF17Q96PE2 2063 aaPredicted RBP6.05□□□□□ -1.44
LTN1-204ENST00000475344 PRAMEF33A0A0G2JMD5 474 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 MGST3O14880 152 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 YY2O15391 372 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 PRAMEF10O60809 474 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 SMARCA1P28370 1054 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 ADKP55263 362 aaKnown RBP6.04□□□□□ -1.44
LTN1-204ENST00000475344 KRT85P78386 507 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 MRPS21P82921 87 aaKnown RBP6.04□□□□□ -1.44
LTN1-204ENST00000475344 MC2RQ01718 297 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 TSHZ1Q6ZSZ6 1077 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 TTC7BQ86TV6 843 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 LNX2Q8N448 690 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 TOR1AIP2Q8NFQ8 470 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 SLC30A5Q8TAD4 765 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 FBXO41Q8TF61 875 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 ZNF764Q96H86 408 aaPredicted RBP6.04□□□□□ -1.44
LTN1-204ENST00000475344 FBXL20Q96IG2 436 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 DMRTA2Q96SC8 542 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 CALCOCO1Q9P1Z2 691 aa6.04□□□□□ -1.44
LTN1-204ENST00000475344 CFAP20Q9Y6A4 193 aaKnown RBP6.04□□□□□ -1.44
LTN1-204ENST00000475344 LRRC14BA6NHZ5 514 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 SNUPNO95149 360 aaKnown RBP6.03□□□□□ -1.44
LTN1-204ENST00000475344 MALP21145 153 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 PHKA1P46020 1223 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 RPS7P62081 194 aaKnown RBP6.03□□□□□ -1.44
LTN1-204ENST00000475344 PSMC1P62191 440 aaKnown RBP6.03□□□□□ -1.44
LTN1-204ENST00000475344 PIGFQ07326 219 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 SNAPC2Q13487 334 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 CCDC93Q567U6 631 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 SP5Q6BEB4 398 aaPredicted RBP6.03□□□□□ -1.44
LTN1-204ENST00000475344 SLC30A10Q6XR72 485 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 CFAP52Q8N1V2 620 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 TFAP2BQ92481 460 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 HEPHQ9BQS7 1158 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 ASPSCR1Q9BZE9 553 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 CTTNBP2NLQ9P2B4 639 aa6.03□□□□□ -1.44
LTN1-204ENST00000475344 CCDC195A0A1B0GUA6 201 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 A0A1W2PS29 197 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 ZNF785A8K8V0 405 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 F2RL2O00254 374 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 GNAI3P08754 354 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 GATA3P23771 443 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 RARRES1P49788 294 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 GNAI1P63096 354 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 AKNAD1Q5T1N1 836 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 KAZNQ674X7 775 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 TAPT1Q6NXT6 567 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 SLC4A10Q6U841 1118 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 NSUN6Q8TEA1 469 aaKnown RBP6.02□□□□□ -1.45
LTN1-204ENST00000475344 SNX19Q92543 992 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 TRIB1Q96RU8 372 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 SMOQ99835 787 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 SPATA5L1Q9BVQ7 753 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 SLC13A1Q9BZW2 595 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 IL17RBQ9NRM6 502 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 HOMER2Q9NSB8 354 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 FOXJ2Q9P0K8 574 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 PCDHA3Q9Y5H8 950 aa6.02□□□□□ -1.45
LTN1-204ENST00000475344 POLRMTO00411 1230 aaKnown RBP6.01□□□□□ -1.45
LTN1-204ENST00000475344 SUN1O94901 812 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
LTN1-204ENST00000475344 CHRM2P08172 466 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 CD38P28907 300 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 FOLR3P41439 243 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 RECQLP46063 649 aaPredicted RBP6.01□□□□□ -1.45
LTN1-204ENST00000475344 ELLP55199 621 aaPredicted RBP6.01□□□□□ -1.45
LTN1-204ENST00000475344 DSC2Q02487 901 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 DYRK1AQ13627 763 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 CCDC142Q17RM4 750 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 ZNF362Q5T0B9 420 aaPredicted RBP6.01□□□□□ -1.45
LTN1-204ENST00000475344 SYCE2Q6PIF2 218 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 ADGRG5Q8IZF4 528 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 LPIN2Q92539 896 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 ASB6Q9NWX5 421 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 NEU2Q9Y3R4 380 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
LTN1-204ENST00000475344 E9PLN8 166 aa6□□□□□ -1.45
LTN1-204ENST00000475344 ORC4O43929 436 aa6□□□□□ -1.45
LTN1-204ENST00000475344 DTNBO60941 627 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms