RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TSSK1BQ9BXA7 367 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.5□□□□□ -0.571e-8■■■□□ 16.6
VAPB-204ENST00000475243 TFR2Q9UP52 801 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 V9GYQ6 96 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 CLTCL1P53675 1640 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 ARHGEF7Q14155 803 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 GOLGA7BQ2TAP0 167 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PHF20Q9BVI0 1012 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PNPLA7Q6ZV29 1317 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 RARS2Q5T160 578 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 PTRHD1Q6GMV3 140 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 CCDC33Q8N5R6 958 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 SEPT1Q8WYJ6 367 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 KATNAL1Q9BW62 490 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GTF2H1P32780 548 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 KCNJ1P48048 391 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ARL4DP49703 201 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 OR2W6PQ8NHA6 318 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 OTUB1Q96FW1 271 aaPredicted RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 GOLPH3Q9H4A6 298 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 CAPN10Q9HC96 672 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 SELENONQ9NZV5 590 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 MAN1A2O60476 641 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 EXOSC10Q01780 885 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 STK4Q13043 487 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 APOL5Q9BWW9 433 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 NT5C1AQ9BXI3 368 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 ZDHHC9Q9Y397 364 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 SLC30A1Q9Y6M5 507 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 DGKIO75912 1065 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 DDHD2O94830 711 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 STAT4Q14765 748 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
VAPB-204ENST00000475243 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 STXBP3O00186 592 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 NPTXRO95502 500 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 CHN1P15882 459 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 VCAM1P19320 739 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 DPYDQ12882 1025 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ORC1Q13415 861 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GNASQ5JWF2 1037 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 PARP9Q8IXQ6 854 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GPR63Q9BZJ6 419 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 AIM2O14862 343 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 PHF2O75151 1096 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 BRD2P25440 801 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 SLC9A5Q14940 896 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 ZRANB3Q5FWF4 1079 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 CLEC4FQ8N1N0 589 aa11.49□□□□□ -0.57
VAPB-204ENST00000475243 CELF4Q9BZC1 486 aaKnown RBP11.49□□□□□ -0.57
VAPB-204ENST00000475243 MEI1Q5TIA1 1274 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 MTHFD1LQ6UB35 978 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 CYGBQ8WWM9 190 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 KLF6Q99612 283 aaPredicted RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 AKAP10O43572 662 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 PRR5LQ6MZQ0 368 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 LPAR1Q92633 364 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 LINC00116Q8NCU8 138 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
VAPB-204ENST00000475243 STX3Q13277 289 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 INPP5DQ92835 1189 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 THTPAQ9BU02 230 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 NR3C2P08235 984 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 MYL2P10916 166 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 BYSLQ13895 437 aaKnown RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 C10orf120Q5SQS8 335 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 STKLD1Q8NE28 680 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 FAM32AQ9Y421 112 aaKnown RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 CRB1P82279 1406 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 MAP2P11137 1827 aaKnown RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 ZBTB39O15060 712 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 CHUKO15111 745 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 MAPRE2Q15555 327 aa11.48□□□□□ -0.57
VAPB-204ENST00000475243 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
VAPB-204ENST00000475243 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms