RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KLHL7Q8IXQ5 586 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 ZNF606Q8WXB4 792 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 SCLT1Q96NL6 688 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 BCO2Q9BYV7 579 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 FAM129AQ9BZQ8 928 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 RASAL2Q9UJF2 1139 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 ANAPC7Q9UJX3 599 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 UTP11Q9Y3A2 253 aaKnown RBP23.19■■□□□ 1.3
CCM2-206ENST00000474617 GPR25O00155 361 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 ZNF157P51786 506 aaPredicted RBP23.18■■□□□ 1.3
CCM2-206ENST00000474617 SLC7A5Q01650 507 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 MARCH8Q5T0T0 291 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 PLEKHA7Q6IQ23 1121 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 KIAA0319LQ8IZA0 1049 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 ALG3Q92685 438 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 USP6NLQ92738 828 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 CYFIP2Q96F07 1278 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 STRIP2Q9ULQ0 834 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 MBLAC1A4D2B0 266 aaPredicted RBP23.18■■□□□ 1.3
CCM2-206ENST00000474617 PSTPIP1O43586 416 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 TSPAN1O60635 241 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 ZMYND10O75800 440 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 GJB1P08034 283 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 IQCF3P0C7M6 154 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 CXCL8P10145 99 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 ARF4P18085 180 aaPredicted RBP23.18■■□□□ 1.3
CCM2-206ENST00000474617 MMP8P22894 467 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 GRM5P41594 1212 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 LHX5Q9H2C1 402 aa23.18■■□□□ 1.3
CCM2-206ENST00000474617 MROH7Q68CQ1 1323 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 KPNA6O60684 536 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 PROSCO94903 275 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 MYBL2P10244 700 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 ANK1P16157 1881 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 RRM1P23921 792 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 POLR2BP30876 1174 aaKnown RBP23.17■■□□□ 1.3
CCM2-206ENST00000474617 ASPAP45381 313 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 DRG2P55039 364 aaKnown RBP23.17■■□□□ 1.3
CCM2-206ENST00000474617 RNASE9P60153 205 aaKnown RBP23.17■■□□□ 1.3
CCM2-206ENST00000474617 SREBF2Q12772 1141 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 RGMBQ6NW40 437 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 C17orf99Q6UX52 265 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 SND1Q7KZF4 910 aaKnown RBP eCLIP23.17■■□□□ 1.3
CCM2-206ENST00000474617 ACAP3Q96P50 834 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 APBA2Q99767 749 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 AP1M1Q9BXS5 423 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 ZFYVE28Q9HCC9 887 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 CPA4Q9UI42 421 aa23.17■■□□□ 1.3
CCM2-206ENST00000474617 KAT6AQ92794 2004 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 GOLGA6BA6NDN3 693 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 LACTBL1A8MY62 500 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 PODXLO00592 558 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 OPA1O60313 960 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 PHF2O75151 1096 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 VTNP04004 478 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 TMEM132DQ14C87 1099 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 CYP1B1Q16678 543 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 CPA5Q8WXQ8 436 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 LRRC45Q96CN5 670 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 AP5M1Q9H0R1 490 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 HOMER3Q9NSC5 361 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 PCYOX1Q9UHG3 505 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 KIAA1257Q9ULG3 409 aa23.16■■□□□ 1.3
CCM2-206ENST00000474617 UMODL1Q5DID0 1318 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 TMEM110-MUSTN1A8MSY1 372 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 ATMINO43313 823 aaPredicted RBP23.15■■□□□ 1.3
CCM2-206ENST00000474617 ZNF865P0CJ78 1059 aaPredicted RBP23.15■■□□□ 1.3
CCM2-206ENST00000474617 GNAT1P11488 350 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 FNTAP49354 379 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 RBP5P82980 135 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 TLK2Q86UE8 772 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 C12orf50Q8NA57 414 aaPredicted RBP23.15■■□□□ 1.3
CCM2-206ENST00000474617 CCDC102AQ96A19 550 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 IP6K2Q9UHH9 426 aa23.15■■□□□ 1.3
CCM2-206ENST00000474617 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.3
CCM2-206ENST00000474617 DYNC1LI2O43237 492 aaPredicted RBP23.14■■□□□ 1.3
CCM2-206ENST00000474617 HSF2BPO75031 334 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 CAPN15O75808 1086 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 CETN2P41208 172 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 LACTBP83111 547 aaPredicted RBP23.14■■□□□ 1.3
CCM2-206ENST00000474617 MAMLD1Q13495 774 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 TERF2Q15554 542 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 SPDYCQ5MJ68 293 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 IFNL1Q8IU54 200 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 NME8Q8N427 588 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 C1orf127Q8N9H9 656 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 CASKIN2Q8WXE0 1202 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 MIS12Q9H081 205 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 DDX47Q9H0S4 455 aaKnown RBP23.14■■□□□ 1.3
CCM2-206ENST00000474617 ADAMTS10Q9H324 1103 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 WDR35Q9P2L0 1181 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 PARP2Q9UGN5 583 aa23.14■■□□□ 1.3
CCM2-206ENST00000474617 FEZ2Q9UHY8 353 aaPredicted RBP23.14■■□□□ 1.3
CCM2-206ENST00000474617 HAS3O00219 553 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 RPLP2P05387 115 aaKnown RBP23.13■■□□□ 1.29
CCM2-206ENST00000474617 SLC10A3P09131 477 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SMIM10L2AP0DMW4 78 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SMIM10L2BP0DMW5 78 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 GSCP56915 257 aaPredicted RBP23.13■■□□□ 1.29
CCM2-206ENST00000474617 DR1Q01658 176 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms