RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MMP8P22894 467 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 ASPAP45381 313 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 FNTAP49354 379 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 GSCP56915 257 aaPredicted RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 YWHAEP62258 255 aaKnown RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 ACVR2BQ13705 512 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 TRADDQ15628 312 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 GPR162Q16538 588 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 IQSEC1Q6DN90 963 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 AADACL2Q6P093 401 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 LRIG3Q6UXM1 1119 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 ZNF410Q86VK4 478 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 NPLOC4Q8TAT6 608 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 ZBTB10Q96DT7 871 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 PTPN18Q99952 460 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 FDXACB1Q9BRP7 624 aaPredicted RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 TINF2Q9BSI4 451 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 TXLNGYQ9BZA5 131 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 FAM124BQ9H5Z6 455 aaPredicted RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 ZNF408Q9H9D4 720 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 RPF1Q9H9Y2 349 aaKnown RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 MRPL47Q9HD33 250 aaKnown RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 CISHQ9NSE2 258 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 CHORDC1Q9UHD1 332 aaPredicted RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 LCMT1Q9UIC8 334 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 SIX4Q9UIU6 781 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 CITO14578 2027 aa10.46□□□□□ -0.74
USP39-214ENST00000474572 H3BRB1 525 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 THAP12O43422 761 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 PSTPIP1O43586 416 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 CXCL8P10145 99 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 EIF4BP23588 611 aaKnown RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 TMOD1P28289 359 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 ATICP31939 592 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 GBP1P32455 592 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 DR1Q01658 176 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 MAMLD1Q13495 774 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 TRPC3Q13507 836 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 ZNF699Q32M78 642 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 PPP1R15BQ5SWA1 713 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 MORN1Q5T089 497 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 MARCH8Q5T0T0 291 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 TTC27Q6P3X3 843 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 NT5DC4Q86YG4 428 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 JAMLQ86YT9 394 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 TMEM192Q8IY95 271 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 THNSL1Q8IYQ7 743 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 C2orf69Q8N8R5 385 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 C1orf127Q8N9H9 656 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 MAIP1Q8WWC4 291 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 CPA5Q8WXQ8 436 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 IFT81Q8WYA0 676 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 RIN2Q8WYP3 895 aaPredicted RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 LRRC45Q96CN5 670 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 DDX27Q96GQ7 796 aaKnown RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 C11orf70Q9BRQ4 267 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 ERP44Q9BS26 406 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 TRIM51Q9BSJ1 452 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 PLVAPQ9BX97 442 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 CELF4Q9BZC1 486 aaKnown RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 FAM129AQ9BZQ8 928 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 LRRC19Q9H756 370 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 ZDHHC18Q9NUE0 388 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
USP39-214ENST00000474572 UTP11Q9Y3A2 253 aaKnown RBP10.45□□□□□ -0.74
USP39-214ENST00000474572 FAM170AA1A519 330 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 RRN3P2A6NIE6 340 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 LACTBL1A8MY62 500 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 H0YGN5 161 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 MYO1FO00160 1098 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 PODXLO00592 558 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 DAPK3O43293 454 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 ADCY6O43306 1168 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 TSPAN1O60635 241 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 F2P00734 622 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 IGHA2P01877 340 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 CALB1P05937 261 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 NFICP08651 508 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 PAEPP09466 180 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 ZNF286BP0CG31 522 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 RARAP10276 462 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
USP39-214ENST00000474572 COILP38432 576 aaPredicted RBP10.44□□□□□ -0.74
USP39-214ENST00000474572 GYS2P54840 703 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 IGBP1P78318 339 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 TFAMQ00059 246 aaKnown RBP10.44□□□□□ -0.74
USP39-214ENST00000474572 PPFIA1Q13136 1202 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 GRIK4Q16099 956 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 UAP1Q16222 522 aaPredicted RBP10.44□□□□□ -0.74
USP39-214ENST00000474572 SLC10A6Q3KNW5 377 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 CFAP58Q5T655 872 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 EMC10Q5UCC4 262 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 ZDHHC24Q6UX98 284 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 DPP9Q86TI2 863 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 DDX42Q86XP3 938 aaKnown RBP eCLIP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms