RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 CYB561D2O14569 222 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 MFAP3LO75121 409 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 GYPCP04921 128 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 ODC1P11926 461 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 LAG3P18627 525 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 SOX5P35711 763 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 KLK7P49862 253 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 ADKP55263 362 aaKnown RBP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 LILRA4P59901 499 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 PTPN21Q16825 1174 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TMEM240Q5SV17 173 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 IQCEQ6IPM2 695 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TMTC1Q8IUR5 882 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TOP6BLQ8N6T0 577 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 SPATA18Q8TC71 538 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TATDN2Q93075 761 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 ZNF558Q96NG5 402 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 CASD1Q96PB1 797 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 GANQ9H2C0 597 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 MIOSQ9NXC5 875 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 GDAP2Q9NXN4 497 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 RWDD3Q9Y3V2 267 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 PCDHB12Q9Y5F1 795 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
COL12A1-206ENST00000474564 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
COL12A1-206ENST00000474564 MED7O43513 233 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 TLL1O43897 1013 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 SERPING1P05155 500 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 CYLC1P35663 651 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 PPM1AP35813 382 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 LHX1P48742 406 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 PDE6CP51160 858 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 CLCNKBP51801 687 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 GUCY2FP51841 1108 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 ARID5AQ03989 594 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 KRT17Q04695 432 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 KLHL30Q0D2K2 578 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 UPP1Q16831 310 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 PDXDC1Q6P996 788 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 COLGALT2Q8IYK4 626 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 GSTCDQ8NEC7 633 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 OR6B3Q8NGW1 331 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 CCDC42Q96M95 316 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 RAD9AQ99638 391 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 OXCT2Q9BYC2 517 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 UBE2OQ9C0C9 1292 aaKnown RBP11.07□□□□□ -0.64
COL12A1-206ENST00000474564 XYLT2Q9H1B5 865 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 SIX2Q9NPC8 291 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 ABHD10Q9NUJ1 306 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 SIX4Q9UIU6 781 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 PLAGL2Q9UPG8 496 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
COL12A1-206ENST00000474564 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 F8VZ95 297 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 TMEM189-UBE2V1I3L0A0 370 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 MEFVO15553 781 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-206ENST00000474564 CCP110O43303 1012 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 LRRN2O75325 713 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 NOL4O94818 638 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 GJB5O95377 273 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SKILP12757 684 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 CD58P19256 250 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 ANXA13P27216 316 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 PCSK1P29120 753 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 GNL1P36915 607 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-206ENST00000474564 FXR1P51114 621 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SLC8A3P57103 927 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 DSC1Q08554 894 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SPA17Q15506 151 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SPOPLQ6IQ16 392 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 KIAA1841Q6NSI8 718 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 PPP1R2P3Q6NXS1 205 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 ARHGEF19Q8IW93 802 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 LRRC8AQ8IWT6 810 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SHC3Q92529 594 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 TMEM169Q96HH4 297 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 SENP8Q96LD8 212 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 DNAJC7Q99615 494 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 NT5C1AQ9BXI3 368 aa11.06□□□□□ -0.64
COL12A1-206ENST00000474564 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms