RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TRIM9Q9C026 710 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 KCNH6Q9H252 994 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 CCL16O15467 120 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 MEFVO15553 781 aaPredicted RBP20.17■□□□□ 0.82
CCDC171-206ENST00000474193 FAM189A1O60320 539 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 ASGR2P07307 311 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 IGFBP6P24592 240 aaPredicted RBP20.17■□□□□ 0.82
CCDC171-206ENST00000474193 ZBTB41Q5SVQ8 909 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 GET4Q7L5D6 327 aaPredicted RBP20.17■□□□□ 0.82
CCDC171-206ENST00000474193 GRASPQ7Z6J2 395 aaPredicted RBP20.17■□□□□ 0.82
CCDC171-206ENST00000474193 NT5DC4Q86YG4 428 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 ELMOD1Q8N336 334 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 FAM122AQ96E09 287 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 BLZF1Q9H2G9 400 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 MAFFQ9ULX9 164 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 C2CD2Q9Y426 696 aa20.17■□□□□ 0.82
CCDC171-206ENST00000474193 VWA8A3KMH1 1905 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 FRMD3A2A2Y4 597 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 KIAA0391O15091 583 aaKnown RBP20.16■□□□□ 0.82
CCDC171-206ENST00000474193 PPP1R37O75864 691 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 POU2F2P09086 479 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 CPB1P15086 417 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 PTMSP20962 102 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 GARTP22102 1010 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 ROR1Q01973 937 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 MRPL58Q14197 206 aaKnown RBP20.16■□□□□ 0.82
CCDC171-206ENST00000474193 CNNM4Q6P4Q7 775 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 GRAMD1CQ8IYS0 662 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 FBXL6Q8N531 539 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
CCDC171-206ENST00000474193 STRA6Q9BX79 667 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 KCNK12Q9HB15 430 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 CYP4F11Q9HBI6 524 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 RAPGEFL1Q9UHV5 662 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
CCDC171-206ENST00000474193 R3HCC1Q9Y3T6 440 aaKnown RBP20.16■□□□□ 0.82
CCDC171-206ENST00000474193 C2orf16Q68DN1 1984 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 PVALEFA0A1B0GWK0 134 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 M0QZQ0 153 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 ABLIM3O94929 683 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 ODC1P11926 461 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 ATF2P15336 505 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 CUL4BQ13620 913 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 ARMCX5Q6P1M9 558 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 RSPO2Q6UXX9 243 aaPredicted RBP20.15■□□□□ 0.82
CCDC171-206ENST00000474193 METTL23Q86XA0 190 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 NOC3LQ8WTT2 800 aaKnown RBP20.15■□□□□ 0.82
CCDC171-206ENST00000474193 PRRX2Q99811 253 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 FAM213AQ9BRX8 229 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 MFSD1Q9H3U5 465 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 DPP3Q9NY33 737 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 EPS15L1Q9UBC2 864 aa20.15■□□□□ 0.82
CCDC171-206ENST00000474193 PDCD11Q14690 1871 aaKnown RBP20.14■□□□□ 0.81
CCDC171-206ENST00000474193 TISP43B9A030 160 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 PRPF6O94906 941 aaKnown RBP20.14■□□□□ 0.81
CCDC171-206ENST00000474193 SMC2O95347 1197 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 LAMP2P13473 410 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 PTPN2P17706 415 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 LILRA4P59901 499 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 UNC13DQ70J99 1090 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 TCEAL8Q8IYN2 117 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 FEZF2Q8TBJ5 459 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 EXOC1Q9NV70 894 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 AFF4Q9UHB7 1163 aaKnown RBP20.14■□□□□ 0.81
CCDC171-206ENST00000474193 FBXL21Q9UKT6 434 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 DSEQ9UL01 958 aa20.14■□□□□ 0.81
CCDC171-206ENST00000474193 TECTAO75443 2155 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 WDR27A2RRH5 827 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 OR6C75A6NL08 312 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 TBC1D4O60343 1298 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 OAZ2O95190 189 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 MBD3O95983 291 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 NFICP08651 508 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 TYMPP19971 482 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 CASP1P29466 404 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 KCNA1Q09470 495 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 PABPC1LQ4VXU2 614 aaKnown RBP20.13■□□□□ 0.81
CCDC171-206ENST00000474193 OVOS1Q6IE37 1185 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 ELOA2Q8IYF1 753 aaPredicted RBP20.13■□□□□ 0.81
CCDC171-206ENST00000474193 MYADMQ96S97 322 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 CDH7Q9ULB5 785 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 TIMM13Q9Y5L4 95 aaPredicted RBP20.13■□□□□ 0.81
CCDC171-206ENST00000474193 DENND4AQ7Z401 1863 aa20.13■□□□□ 0.81
CCDC171-206ENST00000474193 EXTL3O43909 919 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 RPN1P04843 607 aaKnown RBP20.12■□□□□ 0.81
CCDC171-206ENST00000474193 ADSSP30520 456 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 AARSP49588 968 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC171-206ENST00000474193 TAF6P49848 677 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 GUCY2FP51841 1108 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 ADCY1Q08828 1119 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 FAM26FQ5R3K3 315 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 THEM5Q8N1Q8 247 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 ASIC4Q96FT7 647 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 SENP8Q96LD8 212 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 ZNF512Q96ME7 567 aaPredicted RBP20.12■□□□□ 0.81
CCDC171-206ENST00000474193 ZNF560Q96MR9 790 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 KIAA1586Q9HCI6 787 aa20.12■□□□□ 0.81
CCDC171-206ENST00000474193 RBAKQ9NYW8 714 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms