RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZSCAN30Q86W11 494 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 METTL23Q86XA0 190 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 LMO3Q8TAP4 145 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 TATDN2Q93075 761 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 FAM84AQ96KN4 292 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 ZMAT2Q96NC0 199 aaKnown RBP11□□□□□ -0.65
PRPF38A-202ENST00000474048 PPP1R10Q96QC0 940 aaKnown RBP11□□□□□ -0.65
PRPF38A-202ENST00000474048 SNX25Q9H3E2 840 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
PRPF38A-202ENST00000474048 CYP3A43Q9HB55 503 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 IL23AQ9NPF7 189 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 AIPL1Q9NZN9 384 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 SNX9Q9Y5X1 595 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 MICAL3Q7RTP6 2002 aa11□□□□□ -0.65
PRPF38A-202ENST00000474048 SSU72P8A0A1W2PR75 194 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TRIM43BA6NCK2 446 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 GOLGA6L9A6NEM1 432 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TBKBP1A7MCY6 615 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 KPNA7A9QM74 516 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 PTGESO14684 152 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 MED7O43513 233 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TRAPPC3O43617 180 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 KIF4AO95239 1232 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 FGFR1P11362 822 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 ODC1P11926 461 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TNFAIP3P21580 790 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 LRPAP1P30533 357 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 OR1G1P47890 313 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 JAM2P57087 298 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 CCZ1BP86790 482 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 CCZ1P86791 482 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 MEA1Q16626 185 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TMEM270Q6UE05 265 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 LRRC43Q8N309 656 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 RBBP8NLQ8NC74 664 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 APPL2Q8NEU8 664 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 SHC3Q92529 594 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 TRIM43Q96BQ3 446 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 GOLGA2P5Q9HBQ8 144 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 SIX4Q9UIU6 781 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 NR2E3Q9Y5X4 410 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 CENPFP49454 3210 aa10.99□□□□□ -0.65
PRPF38A-202ENST00000474048 SOWAHDA6NJG2 315 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 MEIS3P2A8K0S8 358 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 THAP12O43422 761 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 B3GAT3O94766 335 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 FGBP02675 491 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 CD19P15391 556 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 GNA15P30679 374 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 EIF4A3P38919 411 aaKnown RBP10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 KIF11P52732 1056 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 FAM189BP81408 668 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 ZBTB6Q15916 424 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 PPP1R2P3Q6NXS1 205 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 OR6B3Q8NGW1 331 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 LINC01599Q8WXQ3 324 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 ABHD8Q96I13 439 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 KCNF1Q9H3M0 494 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 HAUS4Q9H6D7 363 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 CISHQ9NSE2 258 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 RNF19AQ9NV58 838 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 DSEQ9UL01 958 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 POLIQ9UNA4 740 aa10.98□□□□□ -0.65
PRPF38A-202ENST00000474048 ANO9A1A5B4 782 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 RNF225M0QZC1 329 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 PIRO00625 290 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 CYB561D2O14569 222 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 MEFVO15553 781 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 CYP26A1O43174 497 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 NDUFA10O95299 355 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 WEE2P0C1S8 567 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 PNMA6AP0CW24 399 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 PRKCIP41743 596 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 ASPAP45381 313 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 CLCNKBP51801 687 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 BMS1Q14692 1282 aaKnown RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 PAN2Q504Q3 1202 aaKnown RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 DCLRE1AQ6PJP8 1040 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 DPH6Q7L8W6 267 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 RTN4RL1Q86UN2 441 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 ZNF677Q86XU0 584 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 FAM71AQ8IYT1 594 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 ADGRF2Q8IZF7 708 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 BADQ92934 168 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 KAT5Q92993 513 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 ELMO3Q96BJ8 720 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 TNIP3Q96KP6 325 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms