RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ZDHHC7Q9NXF8 308 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ANK1P16157 1881 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 TTC28Q96AY4 2481 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 M0QZQ0 153 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 PIRO00625 290 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 RFPL2O75678 378 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 TNNC2P02585 160 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 KRT19P08727 400 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 TAF6P49848 677 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
VAMP4-203ENST00000474047 SV2CQ496J9 727 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 CCDC149Q6ZUS6 474 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 FMR1NBQ8N0W7 255 aaPredicted RBP15.36■□□□□ 0.05
VAMP4-203ENST00000474047 CSGALNACT2Q8N6G5 542 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 CMASQ8NFW8 434 aaPredicted RBP15.36■□□□□ 0.05
VAMP4-203ENST00000474047 SENP8Q96LD8 212 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 FBXL5Q9UKA1 691 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 POLIQ9UNA4 740 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 AGAP1Q9UPQ3 857 aa15.36■□□□□ 0.05
VAMP4-203ENST00000474047 NCOR1O75376 2440 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 MTCL1Q9Y4B5 1905 aaKnown RBP15.35■□□□□ 0.05
VAMP4-203ENST00000474047 ANO9A1A5B4 782 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 PRRG1O14668 218 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 ZMYND10O75800 440 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 RHOBTB3O94955 611 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 SMC2O95347 1197 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 ITGB3P05106 788 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 C8AP07357 584 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 DLATP10515 647 aaKnown RBP15.35■□□□□ 0.05
VAMP4-203ENST00000474047 CPB1P15086 417 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 TNNI1P19237 187 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 PNPLA4P41247 253 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 OVOS1Q6IE37 1185 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
VAMP4-203ENST00000474047 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 OXCT2Q9BYC2 517 aaPredicted RBP15.35■□□□□ 0.05
VAMP4-203ENST00000474047 RMND1Q9NWS8 449 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 DSEQ9UL01 958 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 XIRP2A4UGR9 3374 aa15.35■□□□□ 0.05
VAMP4-203ENST00000474047 CYB561D2O14569 222 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 CALUO43852 315 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 KINO60870 393 aaKnown RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 XYLBO75191 536 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 WNT7BP56706 349 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 RBP5P82980 135 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 ROR1Q01973 937 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 PNOCQ13519 176 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 MRPL58Q14197 206 aaKnown RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 KCNB1Q14721 858 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 DUOXA2Q1HG44 320 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 LMBRD2Q68DH5 695 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 SLC8B1Q6J4K2 584 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 CCDC127Q96BQ5 260 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 PRKD2Q9BZL6 878 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 ITGA11Q9UKX5 1188 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 LOC730098B7Z3J9 87 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 PDXKO00764 312 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 HNRNPA1P09651 372 aaKnown RBP eCLIP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 ALADP13716 330 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 TYMPP19971 482 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 BFSP1Q12934 665 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 RNF135Q8IUD6 432 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 C12orf56Q8IXR9 622 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 THEM5Q8N1Q8 247 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 TDRD5Q8NAT2 981 aaKnown RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 ACSF2Q96CM8 615 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-203ENST00000474047 MTMR12Q9C0I1 747 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 CYP4F11Q9HBI6 524 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 INTS13Q9NVM9 706 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
VAMP4-203ENST00000474047 OR6C75A6NL08 312 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 KPNA7A9QM74 516 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 SPTLC1O15269 473 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 CCL16O15467 120 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 OAZ2O95190 189 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 SNW1Q13573 536 aaKnown RBP15.33■□□□□ 0.04
VAMP4-203ENST00000474047 TPGS2Q68CL5 300 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 OTOP3Q7RTS5 596 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 C1orf127Q8N9H9 656 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 ENGASEQ8NFI3 743 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
VAMP4-203ENST00000474047 WDR27A2RRH5 827 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 HUS1O60921 280 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 CLSTN1O94985 981 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 LRG1P02750 347 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms