RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 IRF7Q92985 503 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ZSWIM3Q96MP5 696 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 CORO1BQ9BR76 489 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 C2orf40Q9H1Z8 148 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 LMAN1LQ9HAT1 526 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 TRPV4Q9HBA0 871 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 IL21Q9HBE4 155 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 GOLGA2P5Q9HBQ8 144 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ZFP14Q9HCL3 533 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 RALYQ9UKM9 306 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PCDHA12Q9UN75 941 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 GDAQ9Y2T3 454 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 INSL5Q9Y5Q6 135 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 TICRRQ7Z2Z1 1910 aa5.65□□□□□ -1.51
SNRNP40-204ENST00000474025 STK36Q9NRP7 1315 aa5.65□□□□□ -1.51
SNRNP40-204ENST00000474025 CHURC1-FNTBB4DL54 471 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 WNT7AO00755 349 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF197O14709 1029 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 TM4SF5O14894 197 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 TRAPPC3O43617 180 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 DTNBO60941 627 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MOSPD3O75425 235 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SEC24AO95486 1093 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 PROS1P07225 676 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SPATA31C1P0DKV0 1188 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 PSMC3P17980 439 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 CCNE1P24864 410 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 ELF1P32519 619 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 CNR2P34972 360 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 VIPR2P41587 438 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MLLT3P42568 568 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 FNTBP49356 437 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 LIMK1P53667 647 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 EPHA5P54756 1037 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MLLT6P55198 1093 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SOX4Q06945 474 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SCRN1Q12765 414 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 PTGDRQ13258 359 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 CALCRLQ16602 461 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 DCAF4L1Q3SXM0 396 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 NT5DC1Q5TFE4 455 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 TPGS2Q68CL5 300 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 HEATR6Q6AI08 1181 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 IL31Q6EBC2 164 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 Q6ZS52 159 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 PDZD4Q76G19 769 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 LONP2Q86WA8 852 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MFSD6LQ8IWD5 586 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SPEM1Q8N4L4 309 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 FAM160A2Q8N612 972 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 ZSCAN18Q8TBC5 510 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 TNFRSF25Q93038 417 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 RSPRY1Q96DX4 576 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MSANTD3Q96H12 275 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 UROC1Q96N76 676 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 MTMR9Q96QG7 549 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 ADPGKQ9BRR6 497 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 KIFC3Q9BVG8 833 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 TTC12Q9H892 705 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 CYP4F11Q9HBI6 524 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 RBM12Q9NTZ6 932 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 C2orf42Q9NWW7 574 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 CYP46A1Q9Y6A2 500 aa5.64□□□□□ -1.51
SNRNP40-204ENST00000474025 SMIM28A0A1B0GU29 152 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 MYBPHLA2RUH7 354 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 HEPACAM2A8MVW5 462 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 PODXLO00592 558 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF263O14978 683 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SYN3O14994 580 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 NEMFO60524 1076 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 MED24O75448 989 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CDKL5O76039 1030 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CTDNEP1O95476 244 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 GJA1P17302 382 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 XBP1P17861 261 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 LIG1P18858 919 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ATP2B1P20020 1258 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 HOXA6P31267 233 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 HOXC13P31276 330 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CTHP32929 405 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 KRT2P35908 639 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 TXKP42681 527 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 NAMPTP43490 491 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SOX9P48436 509 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ARPP19P56211 112 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 FCHO2Q0JRZ9 810 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 TWF1Q12792 350 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 MRPL58Q14197 206 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 LRRC32Q14392 662 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SF3A2Q15428 464 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 AASDHQ4L235 1098 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 XKR4Q5GH76 650 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SWT1Q5T5J6 900 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 N4BP2L1Q5TBK1 243 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CYP4A22Q5TCH4 519 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ATF7IP2Q5U623 682 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 C1orf228Q6PIY5 440 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 TXNDC11Q6PKC3 985 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ALKAL1Q6UXT8 129 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms